Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00812 ATGGAAATTCTGCCTCTCTTTCTAACATGCTTTTTCACACTCCTCACATTCCCAAAACCCACACGTGCCACCCTCCCCGGCACGTGGGAGCTTCTAGTCCAAAACGCAGGCATAGCCTCAATGCACACAGCAGTAACACGCTTCAACACAGTCATCCTCCTCGACCGAACCAACATCGGTCCATCCCGTAAACTCCTCCCAAAAAACCACTGCCGGTTCGACAAAACCGGTTCAAAACAAGACTGCTACGCCCACTCGATTCTCTTCGACCCCAAAACAAACCAACTCCGCCCCTTAAAAATCTTAACCGACACGTGGTGCTCTTCCGGCCAGTTCCTCCCCGACGGAACACTCTTACAAACCGGCGGCGACTTAGACGGGTTCAAAAAGATCCGAAAGTTTAACCCGTGTGAGATAAACGGGTCGTGCGATTGGGAAGAGCTAAACGACGTCGAATTGAGTGAAGGTCGTTGGTATGCGACGAATCAAATTCTTCCAGATGGTTCCATCATCATAATCGGTGGAAGAGGATCAAACACAGTTGAATTCTACCCCAAACGCGAAAACGGCGTCGTTTCGTTTCCGTTTCTTACCGAAACAGAAGATACACAAATGGATAATCTATATCCCTACGTTCATCTTCTCCCTAACGGTAAACTGTTCGTGTTTGCGAATACGAAATCGGTTATGTACGATTTCGTTGAGAATCGTGTTGTTAAGGTTTACCCGGAGTTAACCGGTGGTCCGAGAAACTATCCGTCGGCGGGGTCGTCGGTGATGTTAGCTTTGGAAGGTGAATTTTCTGAGGCGGTTGTTGTTGTTTGCGGCGGCGCTCAATACGGTGCGTTTTTAGAACGGAATGTAGACACGCCGGCGCATGGAAGCTGCGGCCGGATAATGGCGACGGGAGAAAACCCGGTTTGGGAAATGGAGGATATGCCGTTTCAGAGGATAATGGGTGATATGGTAATTTTACCAAACGGTGACGTTTTGATTATCAATGGTGCTATGAAAGGGACGCAAGGTTTTGAATTGGGTTCTGATCCGTGTTTGAACCCGGTTTTATATCGGCCCGATGAACCGGCTGGTTTACGGTTCATGGTTTTGAATCCGGGTACTGTGGCGAGAATGTATCATTCAACAGCGAATTTGTTACCGGATGGACGGGTTTTACTTGCGGGTAGTAACCCGCACGTGTTTTACCGGTTCGATCTCGAGTTTCCGACAGAGTTAAGACTCGAAGCGTTTTCGCCCGAGTATTTGGAATCGGATAAAACGAATATCCGACCCGAGATAGTGGATATACCCGAAACGGTGTCGTATGGAGCGGGTTTTGATGTTGTTGTGAGTGTTGGTTTACCTGTTGTGGGGGTTATTGAAGTGAATTTGGGTAGTGCTCCTTTTGCGACGCATTCTTTTTCTCAGGGTCAACGGTTGGTCAAACTTGGGGTGGGTTCTGCTGTGCCGGAGGGTGGTGATGGGAGGTGGAGGATACGGTGTACGGCGCCGCCGAGTGGGATGGTTGCGCCACCTGGGTATTATATGGTGTTTGCTGTTAATCAAGGTGTTCCAAGTGTGGCACGTTGGATACACGTGTCGTAG 1602 0.4919 MEILPLFLTCFFTLLTFPKPTRATLPGTWELLVQNAGIASMHTAVTRFNTVILLDRTNIGPSRKLLPKNHCRFDKTGSKQDCYAHSILFDPKTNQLRPLKILTDTWCSSGQFLPDGTLLQTGGDLDGFKKIRKFNPCEINGSCDWEELNDVELSEGRWYATNQILPDGSIIIIGGRGSNTVEFYPKRENGVVSFPFLTETEDTQMDNLYPYVHLLPNGKLFVFANTKSVMYDFVENRVVKVYPELTGGPRNYPSAGSSVMLALEGEFSEAVVVVCGGAQYGAFLERNVDTPAHGSCGRIMATGENPVWEMEDMPFQRIMGDMVILPNGDVLIINGAMKGTQGFELGSDPCLNPVLYRPDEPAGLRFMVLNPGTVARMYHSTANLLPDGRVLLAGSNPHVFYRFDLEFPTELRLEAFSPEYLESDKTNIRPEIVDIPETVSYGAGFDVVVSVGLPVVGVIEVNLGSAPFATHSFSQGQRLVKLGVGSAVPEGGDGRWRIRCTAPPSGMVAPPGYYMVFAVNQGVPSVARWIHVS 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00812 533 Pfam Galactose oxidase-like, Early set domain 429 532 IPR015202 -
Vivi5g00812 533 Gene3D Immunoglobulins 429 533 IPR013783 -
Vivi5g00812 533 SUPERFAMILY E set domains 427 532 IPR014756 -
Vivi5g00812 533 FunFam Aldehyde oxidase GLOX 23 427 - -
Vivi5g00812 533 SUPERFAMILY Galactose oxidase, central domain 86 422 IPR011043 -
Vivi5g00812 533 Pfam Glyoxal oxidase N-terminus 41 277 IPR009880 -
Vivi5g00812 533 CDD E_set_GO_C 427 532 IPR015202 -
Vivi5g00812 533 Gene3D - 24 428 IPR037293 -
Vivi5g00812 533 PANTHER SECRETED PROTEIN-RELATED 9 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00812 Vivi-Chr5 15532516 15534841 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00812 - - ahf:112748634 856.67