Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00775 ATGACACGATTTATGTTTTCTCTTGCATGGTCTTTTGTTCTTCTTCTGTCAGCTTCTTCATTAGCTTCTGCTGCTATTGTGGAGCAAACTTTCAATGTTGAGGATGTTACTGTTCAACGTTTGTGCCGTCCACAAGTGATCACAGCTGTGAATGGAAGCTTGCCAGGTCCAACACTTTATGCTCGAGAGGGTGACACTGTTATCATTCATCTTGTCAATAAATCACCATACAATATGACTATTCATTGGCATGGAGTCACACAATTTTTAACTCCTTGGGCAGATGGTCCAGAGTATATAACTCAATGTCCAGTTCCACCAGGTGGAAATTATACATACAAATTCAACATAATAGCACAAGAAGGAACACTTTGGTGGCATGCTCACACTTCTTACCTACGTGCTACTGTCCATGGTGCCATTGTCATTAAGCCACGACTAGGACGTTTGTACCCCTTTCCTAGGGTTTATCAAGAAGTCCCCATATTGCTTGGAGAATGGTGGAGTGCTAATGTTGTAGAAGTTGAGAGAAATGCAACCGATACCGGTAACTCCCCACAAGAATCAAATGCGACCTCAATTAATGGCTTTCTTGGTGATTTGTATAATTGTACTCAAGAACCGATTTACAAGCTCAAAGTGAAACGAGGAAAAACCTACTTACTACGTATTATCAACGCTGCACTCGAGGAACAACATTTCTTTAAGATAGCAAACCATAACTTCACAGTTGTGGCTTTGGATGCTGTCTACACAAACCAATATGAAACAGATGTTGTTGTGATCTCGCCCGGTCAAACCGTCGATGTTCTCTTAAAAACCAATCAAGCTGTTGGTTCTTATTACATGGTTGCCACACCATATCGTTCCTCAAATGTCAGAACCGCAAACTTAACTACTAGAGGAATTGTTGTTTACGATGGTGCCAACGTAACACGAACACCTATAATGCCGATTTTACCTGATTCACATGATACCGCAACGGCTCACAAGTTTTACACCAACATTACAGGGTTGACAAGTGGTCGGCATTGGGTTCCGGTTCCACGCAAAGTCGATGAACATATGTTCATTACATTTGGAATTGGTTTAGAAGAATGCATCAATCCAGGACCGGGTCGTTGTCAAGCGTTTAACTCGCGACTTTCCGCTAACATGAATAATGAATCCTTTGTTCTTCCAGAGGGAAGAGGTGCCTCATTATTGGAAGCATCTTACAAAAATATTAGTGGTGTGTACACCAAGAATTTTCCAGATAATCCACCATTTGAGTTCAATTATACTGACCCTAACTTGCTTACACTTAATGGTACTGCTATTGCATTTGCACCAAAATCCACAAAAGTGAAGACATTAAAATGGAATTCAACACTTCAGATTGTGTATCAAAATACAGCTATTTTGGGAATAGAGAATCATCCTATTCATATTCATGGCTTTAATTTCCATATTTTAGCTCAAGGTTTTGGGAATTATAATGCAACTAGAGATGAACCAAAGTTTAATTTGGTTGATCCTCAAATGCGTAACACTGTTGCTGTGCCAGTTGGAGGATGGGCTGTTCTTAGATTTCAAGCAAATAATCCAGGTGTTTGGTTTGTACATTGTCATTTGGAAAATCATTTGCCATGGGGATTAGCAATGGCTTTTGAGGTTGAGAATGGACCTACTCCTGAAACTAGGGTGCCTCCTCCACCGGCTAATCTTCCCAAGTGTTGA 1719 0.4049 MTRFMFSLAWSFVLLLSASSLASAAIVEQTFNVEDVTVQRLCRPQVITAVNGSLPGPTLYAREGDTVIIHLVNKSPYNMTIHWHGVTQFLTPWADGPEYITQCPVPPGGNYTYKFNIIAQEGTLWWHAHTSYLRATVHGAIVIKPRLGRLYPFPRVYQEVPILLGEWWSANVVEVERNATDTGNSPQESNATSINGFLGDLYNCTQEPIYKLKVKRGKTYLLRIINAALEEQHFFKIANHNFTVVALDAVYTNQYETDVVVISPGQTVDVLLKTNQAVGSYYMVATPYRSSNVRTANLTTRGIVVYDGANVTRTPIMPILPDSHDTATAHKFYTNITGLTSGRHWVPVPRKVDEHMFITFGIGLEECINPGPGRCQAFNSRLSANMNNESFVLPEGRGASLLEASYKNISGVYTKNFPDNPPFEFNYTDPNLLTLNGTAIAFAPKSTKVKTLKWNSTLQIVYQNTAILGIENHPIHIHGFNFHILAQGFGNYNATRDEPKFNLVDPQMRNTVAVPVGGWAVLRFQANNPGVWFVHCHLENHLPWGLAMAFEVENGPTPETRVPPPPANLPKC 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00775 572 Pfam Multicopper oxidase 33 146 IPR011707 GO:0005507
Vivi5g00775 572 ProSitePatterns Multicopper oxidases signature 2. 535 546 IPR002355 GO:0005507
Vivi5g00775 572 Gene3D - 14 145 IPR008972 -
Vivi5g00775 572 NCBIfam laccase 26 572 IPR017761 GO:0046274|GO:0048046|GO:0052716
Vivi5g00775 572 Pfam Multicopper oxidase 420 554 IPR011706 GO:0005507|GO:0016491
Vivi5g00775 572 PANTHER MULTI-COPPER OXIDASE 29 560 IPR045087 -
Vivi5g00775 572 CDD CuRO_3_LCC_plant 412 555 IPR034289 GO:0005507
Vivi5g00775 572 CDD CuRO_2_LCC_plant 160 306 IPR034285 -
Vivi5g00775 572 Gene3D - 157 341 IPR008972 -
Vivi5g00775 572 SUPERFAMILY Cupredoxins 23 169 IPR008972 -
Vivi5g00775 572 Gene3D - 374 572 IPR008972 -
Vivi5g00775 572 SUPERFAMILY Cupredoxins 153 339 IPR008972 -
Vivi5g00775 572 SUPERFAMILY Cupredoxins 349 572 IPR008972 -
Vivi5g00775 572 ProSitePatterns Multicopper oxidases signature 1. 530 550 IPR033138 -
Vivi5g00775 572 Pfam Multicopper oxidase 159 309 IPR001117 -
Vivi5g00775 572 CDD CuRO_1_LCC_plant 29 145 IPR034288 GO:0005507
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00775 Vivi-Chr5 14635491 14638887 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00775 K05909 - gmx:100812336 841.647