Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00758 ATGGTTGCTGATTCCAAGTCCAAATCTGACATCTCATTCGCTGGAACATTTGCCAGCAGTGCTTTCTCCGCATGTTTCGCTGAGGTATGTACCATACCTTTGGATACTGCCAAAGTTAGGCTTCAGCTTCAAAAACAAGCTTTAGCTGGTGATGTATCCTTACCTAAATACAAGGGTTTGCTGGGAACGGTTGGAACAATTGCCCGGGAAGAAGGTCTTTCAGCACTCTGGAAAGGCATTGTGCCAGGACTACATCGTCAGTGTTTGTATGGAGGATTAAGAATTGGGTTATATGAGCCTGTTAAGACTTTCTATACGGGAAGTGACCATGTTGGTGATGTTCCGCTATCAAAGAAAATTCTAGCTGCATTTACGACTGGTGCTGTGGCAATTACAGTTGCGAATCCAACTGATCTTGTCAAAGTCAGACTTCAAGCAGAAGGAAAATTACCTCCTGGAGTTCCCAGGCGCTACTCTGGATCTTTGAATGCTTATTCGTCAATCGTGAGACAGGAAGGAGTTAGAGCTCTTTGGACAGGGCTGGGCCCCAACATAGCAAGAAATGGTATAATCAACGCCGCCGAACTAGCTAGCTATGATCAAGTGAAGCAGACTATTTTGAAAATTCCAGGATTCACCGACAATGTTGTAACTCATCTCTTTGCTGGCCTTGGGGCAGGGTTTTTCGCCGTTTGTATCGGCTCCCCAGTTGATGTGGTCAAGTCAAGAATGATGGGAGATTCTAGTTACAAAAGCACCCTTGATTGTTTTGTCAAAACCTTAAAGAATGATGGACTCATGGCATTTTATAAAGGGTTCATCCCAAATTTTGGACGACTAGGATCTTGGAACGTAATCATGTTTCTAACCTTAGAACAGACTAAGAAGTTCGTCAAAAGTTTAGAGTCATCATGA 915 0.435 MVADSKSKSDISFAGTFASSAFSACFAEVCTIPLDTAKVRLQLQKQALAGDVSLPKYKGLLGTVGTIAREEGLSALWKGIVPGLHRQCLYGGLRIGLYEPVKTFYTGSDHVGDVPLSKKILAAFTTGAVAITVANPTDLVKVRLQAEGKLPPGVPRRYSGSLNAYSSIVRQEGVRALWTGLGPNIARNGIINAAELASYDQVKQTILKIPGFTDNVVTHLFAGLGAGFFAVCIGSPVDVVKSRMMGDSSYKSTLDCFVKTLKNDGLMAFYKGFIPNFGRLGSWNVIMFLTLEQTKKFVKSLESS 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00758 304 Gene3D Mitochondrial carrier domain 14 303 IPR023395 -
Vivi5g00758 304 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 25 - -
Vivi5g00758 304 Pfam Mitochondrial carrier protein 113 208 IPR018108 -
Vivi5g00758 304 Pfam Mitochondrial carrier protein 215 299 IPR018108 -
Vivi5g00758 304 Pfam Mitochondrial carrier protein 10 107 IPR018108 -
Vivi5g00758 304 ProSiteProfiles Solute carrier (Solcar) repeat profile. 11 104 IPR018108 -
Vivi5g00758 304 ProSiteProfiles Solute carrier (Solcar) repeat profile. 118 205 IPR018108 -
Vivi5g00758 304 FunFam Mitochondrial uncoupling protein 1 14 302 - -
Vivi5g00758 304 SUPERFAMILY Mitochondrial carrier 10 293 IPR023395 -
Vivi5g00758 304 PRINTS Mitochondrial brown fat uncoupling protein signature 18 30 IPR002030 GO:0006839|GO:0031966
Vivi5g00758 304 PRINTS Mitochondrial brown fat uncoupling protein signature 45 64 IPR002030 GO:0006839|GO:0031966
Vivi5g00758 304 PRINTS Mitochondrial brown fat uncoupling protein signature 98 110 IPR002030 GO:0006839|GO:0031966
Vivi5g00758 304 PRINTS Mitochondrial brown fat uncoupling protein signature 168 185 IPR002030 GO:0006839|GO:0031966
Vivi5g00758 304 PRINTS Mitochondrial brown fat uncoupling protein signature 211 229 IPR002030 GO:0006839|GO:0031966
Vivi5g00758 304 PRINTS Mitochondrial brown fat uncoupling protein signature 286 304 IPR002030 GO:0006839|GO:0031966
Vivi5g00758 304 ProSiteProfiles Solute carrier (Solcar) repeat profile. 214 297 IPR018108 -
Vivi5g00758 304 PANTHER MITOCHONDRIAL DICARBOXYLATE CARRIER-RELATED 13 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00758 Vivi-Chr5 14431948 14437999 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g00758 8 304 Miscellaneous Gene Families AT3G54110 83.557 0.0 521
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00758 K15103 - gmx:100809667 557.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g02115 6 95135694 95140013 Vivi5g00758 5 14431948 14437999 PCT