Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00705 ATGAGTACTACATTGCTTTCATTCCTTCTCTCCTACTTCTTCATATATCACACTTTTGCTTCTGCCAAATGTCTCCAAGATCAACAATCATTGTTGCTTCAATTAAAAAACAATTTCACATTTGATCCTCAATTTTCAACGAAACTAAAATTGTGGAATGAAAACACGGCTTGCTGTAATTGGAGTGGTGTAACATGTAACAATGAGGGACATGTTATTGGCCTTGATCTTAGTCAAGAATCAATCTATGGTGGATTTGACGATTCAAGCACTCTTTTTAGTCTCCAATATCTCCAAAAACTGAATTTGGCTTATAACTATTTCAATTCTTCCATACCATCAGGATTCCGCAAGTTGGCGACGTTGAATTATCTGAATTTGTCAAATTCTCACGTTGTGAGGAATATTCCTATGGAGATTTCAAAGCTTACAAGATTGAACTTCCAAGGAAATCAATTACAAGGGCCAATTCCCAGGTCTCTATTCCACTGCTCATCATTAGAGGTATTGGACATTGGATCAAATCAAATTATTGATCATTTTCCGTGCTTCTTAAATGAAATACCAAAACTTAGTGCCTTGGTTTTGAGGAATAACAGATTTCATGGTTCTATACAATGTTCAGAAAATAAACCTTGGAAGTCGATTCAAATTGTGGACATTGCTTTCAACAACTTCAATGGAAAACTACCTACACAGTATTTTAAAACTTGGGAAAGAATGATATATGATGAAAATGTTGCACATGACATCAACTACAACATGTCACGAGACTACCCATATTATCATGATAGTGTTACAGTTACATGTAAAGGCCAACGACAAGATTTGGTTAAAATTTTAACAATTTTCAAAGCCATTGATTTCTCATTCAATTCTTTTGAAGGCCGAATACCTCTTTCGTTGATGGACTTCAAAGCACTATATGTTTTGAATTTTTCAAACAATGGTCTTACAGGTGAGATCCCATCTTCAATAGGGAACATGAAACAATTAGAGTCATTGGACTTCTCAAATAACTCCTTGTTTGGTGAAATTCCAGTGCAACTATCAAATTTGTCCTTCCTTTCTTATTTGAACCTATCCTTCAATAATTTGGTGGGGAAGATTCCAACAGGTACTCAACTTCAATCATTTCCAACTTCTTCCTTTGAAGGGAATCGTGGACTATATGGTCCTCCATTGGATGAAATTCCAATTGGTGAAACAGAGGACTTGCATCCACAACCAGCATGTGAAAAACTAGCTTGTTCAACAGAGTGGAACTTTTTATGTGTTGAATTTGGATTTGTTTTTGGACTTGGAATGATCATTGGACCTATCATGTTTTGGAAGAAATGGAGGGTGCGATATTGGAAACTTCTAGACAAAATTCTTTGTAGAATTTTTCCTTGGATGCATCTCGAATATGCAACTAAGAGAGGAAAAACGTATACAGTTTTAAGGTGGTAG 1452 0.3554 MSTTLLSFLLSYFFIYHTFASAKCLQDQQSLLLQLKNNFTFDPQFSTKLKLWNENTACCNWSGVTCNNEGHVIGLDLSQESIYGGFDDSSTLFSLQYLQKLNLAYNYFNSSIPSGFRKLATLNYLNLSNSHVVRNIPMEISKLTRLNFQGNQLQGPIPRSLFHCSSLEVLDIGSNQIIDHFPCFLNEIPKLSALVLRNNRFHGSIQCSENKPWKSIQIVDIAFNNFNGKLPTQYFKTWERMIYDENVAHDINYNMSRDYPYYHDSVTVTCKGQRQDLVKILTIFKAIDFSFNSFEGRIPLSLMDFKALYVLNFSNNGLTGEIPSSIGNMKQLESLDFSNNSLFGEIPVQLSNLSFLSYLNLSFNNLVGKIPTGTQLQSFPTSSFEGNRGLYGPPLDEIPIGETEDLHPQPACEKLACSTEWNFLCVEFGFVFGLGMIIGPIMFWKKWRVRYWKLLDKILCRIFPWMHLEYATKRGKTYTVLRW 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00705 483 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1-LIKE-RELATED 143 397 IPR046956 -
Vivi5g00705 483 Pfam Leucine Rich repeat 163 177 IPR001611 GO:0005515
Vivi5g00705 483 FunFam Nuclear pore complex protein NUP107 25 183 - -
Vivi5g00705 483 Pfam Leucine Rich Repeat 331 353 IPR001611 GO:0005515
Vivi5g00705 483 Pfam Leucine rich repeat N-terminal domain 26 67 IPR013210 -
Vivi5g00705 483 Gene3D Ribonuclease Inhibitor 102 405 IPR032675 -
Vivi5g00705 483 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 276 398 - -
Vivi5g00705 483 Gene3D Ribonuclease Inhibitor 18 101 IPR032675 -
Vivi5g00705 483 SUPERFAMILY L domain-like 24 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00705 Vivi-Chr5 13397829 13400866 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g00705 94 448 Receptor kinase-like Gene Family AT3G05660 42.740 3.49e-77 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00705 - - vvo:131606301 973