Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00661 ATGACCAACACAAACACCAAAACCGTCGCCACGTGGCGCAACATCCCCAACCTCCTCAACTCCTCTTCCCACGGCGTCGTTTCACGCAACCACCTCTTCAACGACGCCGTCTTCAGCTTCACCGGCGGAAATGCCGTTCGTCTTAAATTCGCCACCGTCTCCGCCTCACAAACCAAGCCTGACAAGGAATTCACTCCCACGGTGGCTCAGCTTCTAAACCACCCGCTCGCCGTTGTCGCTCTTGTTCCTAAAGATGCTGCTCTGTTTCTCGCCGGAGCTGTTGCTGGTGCTGCCGCTAGGACCGTCACTGCTCCACTTGATCGCATCAAGCTTCTCATGCAGACTCATGGAGTGCGAATAGGTCAAGAAAGTGCGAAGAAGACAATTGGTTTTATTGAGGCAATAACAATGATAGGGAATGAAGAAGGCATTAGAGGTTACTGGAAGGGTAACCTACCCCAGGTTATTAGGGTTATACCTTATAGTGCAGTCCAGCTCTTTGCTTATGAAATTTATAAGAAGATATTCCAGGGAAAAAATGGTGAGCTCTCTGTTGTGGGAAGACTTGCAGCAGGTGCTTTTGCGGGCATGACATCAACTTTTATAACTTACCCATTAGATGTCCTGAGATTACGATTAGCTGTTGAACCTGGGTGTCGAACAATGACAGAGGTTGCCTTGAGCATGGTAAGAGAGGAAGGTTTTGCATCTTTCTACTATGGCCTTGGGCCTTCTCTTATTGGAATAGCTCCATATATTGCAGTTAACTTTTGTGTTTTTGACTTACTAAAGAAGTCGTTGCCGGAGAAATATCAAAAGAGAACTGAAGCATCTCTAATCACCGCCGTGCTTTCAGCGTCTCTTGCCACTCTTACATGCTATCCTCTGGACACAGTTCGAAGACAGATGCAACTGAAGGGTACACCTTATAAGACAGTATTAGATGCCATTTCTGGTATTGTGGCACGGGATGGACTTATTGGCTTGTATCGCGGATTTGTACCTAATGCCTTAAAAAACCTACCAAACAGCAGCATCAGGCTTACCACATATGACATTGTCAAACGCCTGATTGCGGCTAGTGAGAAAGAGTTTCAAACAATTGCTGAGGAAAACCGCAACAAAATAAAGAAACATCCGTAG 1143 0.4637 MTNTNTKTVATWRNIPNLLNSSSHGVVSRNHLFNDAVFSFTGGNAVRLKFATVSASQTKPDKEFTPTVAQLLNHPLAVVALVPKDAALFLAGAVAGAAARTVTAPLDRIKLLMQTHGVRIGQESAKKTIGFIEAITMIGNEEGIRGYWKGNLPQVIRVIPYSAVQLFAYEIYKKIFQGKNGELSVVGRLAAGAFAGMTSTFITYPLDVLRLRLAVEPGCRTMTEVALSMVREEGFASFYYGLGPSLIGIAPYIAVNFCVFDLLKKSLPEKYQKRTEASLITAVLSASLATLTCYPLDTVRRQMQLKGTPYKTVLDAISGIVARDGLIGLYRGFVPNALKNLPNSSIRLTTYDIVKRLIAASEKEFQTIAEENRNKIKKHP 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00661 380 ProSiteProfiles Solute carrier (Solcar) repeat profile. 183 266 IPR018108 -
Vivi5g00661 380 SUPERFAMILY Mitochondrial carrier 86 353 IPR023395 -
Vivi5g00661 380 PANTHER SOLUTE CARRIER FAMILY 25 66 358 - -
Vivi5g00661 380 FunFam Envelope ADP,ATP carrier protein 85 363 - -
Vivi5g00661 380 Pfam Mitochondrial carrier protein 277 359 IPR018108 -
Vivi5g00661 380 Pfam Mitochondrial carrier protein 88 179 IPR018108 -
Vivi5g00661 380 Pfam Mitochondrial carrier protein 182 269 IPR018108 -
Vivi5g00661 380 PRINTS Mitochondrial carrier protein signature 88 101 IPR002067 GO:0055085
Vivi5g00661 380 PRINTS Mitochondrial carrier protein signature 239 257 IPR002067 GO:0055085
Vivi5g00661 380 PRINTS Mitochondrial carrier protein signature 101 115 IPR002067 GO:0055085
Vivi5g00661 380 PRINTS Mitochondrial carrier protein signature 150 170 IPR002067 GO:0055085
Vivi5g00661 380 PRINTS Mitochondrial carrier protein signature 282 304 IPR002067 GO:0055085
Vivi5g00661 380 PRINTS Mitochondrial carrier protein signature 198 216 IPR002067 GO:0055085
Vivi5g00661 380 ProSiteProfiles Solute carrier (Solcar) repeat profile. 273 357 IPR018108 -
Vivi5g00661 380 Gene3D Mitochondrial carrier domain 85 358 IPR023395 -
Vivi5g00661 380 ProSiteProfiles Solute carrier (Solcar) repeat profile. 83 175 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00661 Vivi-Chr5 12476408 12481305 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g00661 7 375 Organic Solute Cotransporters AT3G51870 67.989 0.0 510
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00661 K14684 - gmx:100796878 583.948