Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00642 ATGGATGCGCACGCGGTGCATTTGGCTATGGCGGCACTCGTCGGAGCCTCCATCGTGGCTGTATCGGCGTACTACATGCACCGCAAGACGCTAACGCAGCTACTGGAGTTCGCGCGTACGGTTGAGCCTGACGGCGGTTCCGACGACGGCGAATCACCGTTGCATTCGAAGAGGAGGCGTGGAGGTTCTAGGAGGAGAGGGAACGGAGGTTATCGCCGTGGCTCGGGTTCGTTGCCGGATGTTACGGCGATTTCTGGTGGACTTGACGGAAATGGCAATGGACTGATGCACGTTGAAGGGATTCCGGCTGGATTGCCTCGGTTGCAAACGCTCCGTGAAGGAAAATCTGCAAATGCTGGTTCATTTAAGAGAAATATTTTAAGACCAACTTCTCCCAAGTCTCCTGTTGCAAGTGTCAGTGCCTTTGAAAGTGTAGAGGGATCAGATGATGAAGATGATTTGACAGACGGAGCCAAACTGGATGCTACATATCTGCACACAAATGGAAATGCAGGTGGAGATGGGAAAAATCCATATGAGACTGTGTCTAATCATGTCAATACAAATGGAGAGCAGATGGCAATCGCTGCTTCAAGTATGAACCGTTCTAAAAGTATTTCTGGTGATCTGCATGGCGTGCAGCCTGATCCAATAGCAGCTGACATTCTCAGGAAAGAGCCAGAGCAAGAAATTTTTGCTCGATTGAGAATTACTCCCATGGAGGCTCCATCACCTGATGAAGTTGAATCCTATGTGATTCTCCAAGAATGTCTTGAAATGAGGAAAAGATATGTTTTTCAAGATGCAATTGCTCCATGGGAGAAAGAAGTTATATCTGACCCCTGTACTCCAAAACCTAACCTAGATCCCTTCCTTTACAGACCCGAACCAAAGTCTGATCATTACTTTGAAATGCAGGATGGAGTTATTCACGTGTATCCAAATAAAAACTCCAAAGAAGAGCTTTTTCCTGTTGCCGATGCAACTACATTTTTCACTGACCTTCATCAGATACTTCGAGTTATAGCAGCAGGGAATATCAGAACTTTATGCCACCACAGGCTTAATCTTCTAGAACAAAAATTCAATCTTCATTTGATGCTCAATGCGGATAGGGAATTTCTCGCCCAGAAAAGTGCCCCACATCGAGACTTCTATAATGTTAGAAAAGTGGATACACATGTCCACCACTCAGCATGCATGAATCAGAAACATCTTTTGAGATTCATAAAGTCAAAGCTGAGGAAAGAGCCTGATGAGGTTGTAATATTTCGAGATGGAACATATTTGACATTGAAAGAGGTTTTTGAGAGTCTAGATTTAACTGGATATGATCTCAATGTTGACCTTTTGGACGTTCATGCTGACAAAAGTACATTTCATCGCTTTGACAAGTTCAATCTTAAATACAATCCTTGTGGTCAAAGTAGGCTCAGGGAGATATTTTTGAAGCAGGACAACCTCATCCAAGGTCGATTCCTTGGTGAGCTCACAAAGCAAGTGATTTCTGATCTTGAAGCCAGTAAATATCAGATGGCTGAATATAGACTATCAATATATGGTAGGAAGCAAAGTGAGTGGGACCAACTAGCTAGCTGGATAGTGAATAATGAACTGTACAGTGAGAATGTTGTTTGGTTGATTCAGCTTCCAAGATTGTATAATATATACAAAGACATGGGAATTGTGACCTCATTCCAGAACATGCTTGACAATATCTTCATTCCACTTTTTGAGGTTACCGTTGATCCTAATTCACATCCTCAGCTGCATGTTTTCTTGAAACAGGTTGTGGGGTTGGATTTGGTGGATGATGAAAGCAAACCTGAAAGACGACCAACAAAACACATGCCTACGCCTGCTCAGTGGACTAATGTATTCAATCCAGCATATTCATACTATGTGTATTACTGTTACGCGAATCTGTACACCTTAAACAAGCTCCGTGAATCAAAGGGAATGACTACAATCAAATTTCGTCCTCATTCTGGAGAGGCTGGTGATATTGACCACCTTGCTGCTACCTTCCTTACTGCTCATAACATCGCACATGGAATTAACTTGAGAAAGTCGCCTGTGCTTCAATATTTATATTATTTGGCCCAGATTGGACTGGCAATGTCTCCTCTGAGCAATAACTCTCTATTTTTAGACTACCATCGAAATCCTCTTCCCCTGTTCTTCTTACGGGGTTTGAATGTATCACTTTCAACTGATGATCCACTCCAAATTCACTTAACAAAGGAACCATTGGTTGAAGAGTACAGTATAGCTGCTTCTGTGTGGAAACTGAGCTCATGTGATTTATGTGAGATTGCCCGTAATTCGGTCTATCAATCAGGTTTCTCGCATGCTTTAAAGTCACACTGGATTGGTAAGGAATACTACAAGAGAGGGCCAAATGGAAATGACATTCATAGAACAAATGTTCCTCACATTCGGTTGGAATTTCGTGAAACAATTTGGAGAGAGGAGATGCAACAGGTTTATTTGGGAAAACCCATCATTCCTGAAGAAATAGAGAAATAG 2529 0.4267 MDAHAVHLAMAALVGASIVAVSAYYMHRKTLTQLLEFARTVEPDGGSDDGESPLHSKRRRGGSRRRGNGGYRRGSGSLPDVTAISGGLDGNGNGLMHVEGIPAGLPRLQTLREGKSANAGSFKRNILRPTSPKSPVASVSAFESVEGSDDEDDLTDGAKLDATYLHTNGNAGGDGKNPYETVSNHVNTNGEQMAIAASSMNRSKSISGDLHGVQPDPIAADILRKEPEQEIFARLRITPMEAPSPDEVESYVILQECLEMRKRYVFQDAIAPWEKEVISDPCTPKPNLDPFLYRPEPKSDHYFEMQDGVIHVYPNKNSKEELFPVADATTFFTDLHQILRVIAAGNIRTLCHHRLNLLEQKFNLHLMLNADREFLAQKSAPHRDFYNVRKVDTHVHHSACMNQKHLLRFIKSKLRKEPDEVVIFRDGTYLTLKEVFESLDLTGYDLNVDLLDVHADKSTFHRFDKFNLKYNPCGQSRLREIFLKQDNLIQGRFLGELTKQVISDLEASKYQMAEYRLSIYGRKQSEWDQLASWIVNNELYSENVVWLIQLPRLYNIYKDMGIVTSFQNMLDNIFIPLFEVTVDPNSHPQLHVFLKQVVGLDLVDDESKPERRPTKHMPTPAQWTNVFNPAYSYYVYYCYANLYTLNKLRESKGMTTIKFRPHSGEAGDIDHLAATFLTAHNIAHGINLRKSPVLQYLYYLAQIGLAMSPLSNNSLFLDYHRNPLPLFFLRGLNVSLSTDDPLQIHLTKEPLVEEYSIAASVWKLSSCDLCEIARNSVYQSGFSHALKSHWIGKEYYKRGPNGNDIHRTNVPHIRLEFRETIWREEMQQVYLGKPIIPEEIEK 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00642 842 FunFam Probable amp deaminase 479 825 - -
Vivi5g00642 842 Gene3D - 301 825 - -
Vivi5g00642 842 Gene3D - 401 491 - -
Vivi5g00642 842 MobiDBLite consensus disorder prediction 165 184 - -
Vivi5g00642 842 Pfam AMP deaminase 239 829 IPR006329 GO:0003876|GO:0032264
Vivi5g00642 842 NCBIfam AMP deaminase 299 828 IPR006329 GO:0003876|GO:0032264
Vivi5g00642 842 MobiDBLite consensus disorder prediction 42 85 - -
Vivi5g00642 842 FunFam AMP deaminase 401 491 - -
Vivi5g00642 842 CDD AMPD 331 826 IPR006329 GO:0003876|GO:0032264
Vivi5g00642 842 PANTHER AMP DEAMINASE 143 831 IPR006329 GO:0003876|GO:0032264
Vivi5g00642 842 MobiDBLite consensus disorder prediction 42 57 - -
Vivi5g00642 842 SUPERFAMILY Metallo-dependent hydrolases 237 836 IPR032466 -
Vivi5g00642 842 ProSitePatterns Adenosine and AMP deaminase signature. 735 741 IPR006650 GO:0009168|GO:0019239
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00642 Vivi-Chr5 12117392 12129263 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00642 K01490 - gmx:100789965 1496.87