Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00640 ATGGGCGCGAAGCAAATGGAAGAGATTCAGAAGAAATTGGGAACGCTGAATTATCCAAGATCAAATGCATCTGCACAGTCCCTTCTATTTGCTGGCATGGAGCGCTACGCTCTTCTCGAATGGCTCTTCTTTCGACTATTAGGTGATAAGTCACCCTTCTCTCAACAAAACTTACACGGCGATGCTCTTGATCGTGACGAGGAGACAGCTCGAATTCAATATTTGGCAGAAATTGCTAAGTTTCTGGGCATTACAACAACTGTAGATACAGAAGCCATTCAAGGACATGGAAGCTATGAGGACCGCACTGAAATGCTTCGTCTAATTGTAGATCTAGTGGAGGCAACCATATATGCTGATAATCCAGAATGGAGTGTTGATGAGCAGGTAGCCAAAGACATCCACTTGATAGATTCCATTGCCGAAAGACAGGCTCATATATTTTCCGAAGAATGTAAATTATTTCCTGCAGATGTTCAGATTCAGTCTATATATCCATTGCCAGAAGTTTCGGAGCTGGAGTCAAAGCTTACTGAACAATCAAAAATATTATTGAATCTTCAACAAAAAGTTGATGACTTGGCATCCAAGCATGCTTACAATCCGGATGAGGAGTATACTGAGGTGGAATCTGAACTGCGAGCGCATTTAGAATCTTTCCTAGAAACTGCTAGATCATTCAACATGATTTACACCAAGGAAATTCGTCCATGGACACATATGATGGAGGTTCCACAACTTCACGGGTTTGGACCAGCTGCCAATCGATTATTGGAGGCGTACAAAATGCTTTTAAAGTTTTTAGGGAACCTGCAAAATCTTAGAGACTCACATGCTGCACTTGCTTTCGGATCTTCTGAAACATCAGGAGGGCCTTCTTCTGTCTCAGCAATAATCTCTGAATGTGAATCCGAAATGACAGTTATAAATCGAGATCTTGGAATTCTTTCCGCCTCCATTGCTCGTGAACAGGCAGAAAAGATGAGTATTTGA 993 0.4189 MGAKQMEEIQKKLGTLNYPRSNASAQSLLFAGMERYALLEWLFFRLLGDKSPFSQQNLHGDALDRDEETARIQYLAEIAKFLGITTTVDTEAIQGHGSYEDRTEMLRLIVDLVEATIYADNPEWSVDEQVAKDIHLIDSIAERQAHIFSEECKLFPADVQIQSIYPLPEVSELESKLTEQSKILLNLQQKVDDLASKHAYNPDEEYTEVESELRAHLESFLETARSFNMIYTKEIRPWTHMMEVPQLHGFGPAANRLLEAYKMLLKFLGNLQNLRDSHAALAFGSSETSGGPSSVSAIISECESEMTVINRDLGILSASIAREQAEKMSI 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00640 330 PANTHER HAUS AUGMIN-LIKE COMPLEX SUBUNIT 7 1 324 IPR029711 -
Vivi5g00640 330 Pfam Plant nuclear matrix protein 1 (NMP1) 6 323 IPR010604 GO:0051011
Vivi5g00640 330 Coils Coil 170 190 - -
Vivi5g00640 330 PIRSF NMP1 1 330 IPR010604 GO:0051011
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00640 K16590 - gmx:100787842 583.948