Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00638 ATGGCCACAAATCTAGGCTCTATCGAAACATGCAAACCATGCAACAACGACCTAGCATCTCCCCCAAACGGCACCGTTTCAACCATCCAAAAATCCACTTCATCAACCACCTTAGCCTCCTCTCAATCCACCTTAGGCAGCCACCTAGCACGGCGGCTAGTCGAAGTCGGAGTCACCGACGTCTTCACCGTTCCGGGAGACTTCAACCTGACTCTACTCGACTATCTGATCGCTGAACCTAAACTGAAAAACATTGGTTGTTGTAACGAACTCAATGCCGGATACGCTGCTGATGGATACGCGCGGGCTAGAGGCGTGGGCGCGTGTGTTGTTACTTTTACTGTTGGTGGATTAAGTGTGATTAATGCTATTGCTGGTGCTTATAGTGAGAATTTGCCACTGATTTGCATTGTTGGTGGTCCTAATTCTAATGATTTTGGAACTAATAGAATTCTTCATCATACTATTGGTTTGCCTGATTTTAGCCAGGAGCTCAGATGTTTCCAAACTGTTACTTGCCATCAGGCTGTGGTGAATAATTTGGAAGATGCTCATGAAATGATTGATACTGCAATCTCAACGGCATTGAAAGAAAGCAAGCCTGTGTATATAAGCATAAGCTGTAATTTAGCAGGAATTCCTCACCCTACTTTCAGTCGTGAACCTGTTCCGTTTTCTCTATCCCCAAAATTGACTAATCAGATGGGATTGGAGGCAGCAGTGGAAGCAGCAGCGGAGTTTCTAAACAAAGCAGTAAAACCAGTTCTTGTAGCTGGACCAAAAATAAGAGTAGCAAAAGCATCTAAGGCTTTTACTGAACTAGCTGATAAAAGTGCTTATCCATATTCAGTTATGCCATCAGCAAAAGGACTAGTTCCTGAGAATCACCAACATTTCATTGGAACATTTTGGGGTGCAGTGAGCACTTCATTCTGCGCTGAGATTGTCGAATCAGCAGACGCATACTTGTTTGCTGGACCGATTTTCAATGATTACAGTTCGGTTGGTTATTCACTTCTTTTGAAGAAGGAAAAATCTATTATTGTTGAGCCTAATAGGGTTGTGATCGGAAATGGTCTTGCATTTGGGTGTATTTTGATGAAGGATTTTCTTAGCGCGCTCGCGAAGCGTATTAAGAGGAATAATACCGCTTACGAAAATTATCATAGGATATTTGTTCCTGAAGGTGTGCCTCTGAAATCTGAACCTAGAGAACCTTTGAGGGTTAATGTTCTTTTTCAACATATTCAGAATATGCTGTCTAGTGAAACTGCTGTTATTGCTGAGACTGGTGATTCTTGGTTTAACTGCCAAAAGCTGAAATTGCCAGAAGGATGTGGGTATGAGTTCCAAATGCAATATGGATCAATTGGATGGTCTGTTGGTGCAACTCTTGGTTATGCACAAGCTGTTCCTGATAAGCGTGTCATTGCTTGCATTGGTGATGGAAGTTTTCAGGTGACAGCACAAGATGTATCCACAATGCTGAGATGTGGACAGAAGACCATAATCTTCTTGATAAACAATGGTGGATATACTATTGAAGTTGAAATCCATGATGGACCATACAATGTGATTAAGAATTGGAACTATACTGGCTTGGTTGATGCAATCCACAACGGTCAAGGAAATTGCTGGACCACTAAGGTCACTTGTGAAGAGGAGCTTGTTGAAGCAATTGAGACAGCAACAGGAGAGAAGAAGGATAGTTTCTGCTTCATTGAGGTGATTGCTCACAAGGATGACACAAGCAAAGAGTTGCTTGAATGGGGGTCGAGGGTGTCTTCTGCAAATAGCCGTCCTCCGAATCCTCAGTGA 1818 0.4274 MATNLGSIETCKPCNNDLASPPNGTVSTIQKSTSSTTLASSQSTLGSHLARRLVEVGVTDVFTVPGDFNLTLLDYLIAEPKLKNIGCCNELNAGYAADGYARARGVGACVVTFTVGGLSVINAIAGAYSENLPLICIVGGPNSNDFGTNRILHHTIGLPDFSQELRCFQTVTCHQAVVNNLEDAHEMIDTAISTALKESKPVYISISCNLAGIPHPTFSREPVPFSLSPKLTNQMGLEAAVEAAAEFLNKAVKPVLVAGPKIRVAKASKAFTELADKSAYPYSVMPSAKGLVPENHQHFIGTFWGAVSTSFCAEIVESADAYLFAGPIFNDYSSVGYSLLLKKEKSIIVEPNRVVIGNGLAFGCILMKDFLSALAKRIKRNNTAYENYHRIFVPEGVPLKSEPREPLRVNVLFQHIQNMLSSETAVIAETGDSWFNCQKLKLPEGCGYEFQMQYGSIGWSVGATLGYAQAVPDKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGQGNCWTTKVTCEEELVEAIETATGEKKDSFCFIEVIAHKDDTSKELLEWGSRVSSANSRPPNPQ 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00638 605 Gene3D - 232 393 - -
Vivi5g00638 605 Pfam Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 44 211 IPR012001 GO:0030976
Vivi5g00638 605 Pfam Thiamine pyrophosphate enzyme, central domain 241 358 IPR012000 GO:0000287|GO:0030976
Vivi5g00638 605 CDD TPP_PYR_PDC_IPDC_like 48 208 IPR047213 -
Vivi5g00638 605 PIRSF Pyruvt_ip_decrb 38 600 IPR012110 GO:0016831
Vivi5g00638 605 Gene3D - 400 587 - -
Vivi5g00638 605 FunFam Pyruvate decarboxylase 1 231 393 - -
Vivi5g00638 605 FunFam pyruvate decarboxylase 1 41 217 - -
Vivi5g00638 605 SUPERFAMILY DHS-like NAD/FAD-binding domain 236 384 IPR029035 -
Vivi5g00638 605 PANTHER PYRUVATE DECARBOXYLASE 30 600 IPR012110 GO:0016831
Vivi5g00638 605 Gene3D - 40 217 - -
Vivi5g00638 605 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 406 600 IPR029061 -
Vivi5g00638 605 FunFam Pyruvate decarboxylase 1 400 587 - -
Vivi5g00638 605 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 44 218 IPR029061 -
Vivi5g00638 605 Pfam Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 451 576 IPR011766 GO:0003824|GO:0030976
Vivi5g00638 605 CDD TPP_PDC_IPDC 406 588 IPR047214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00638 Vivi-Chr5 11911234 11913975 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00638 K01568 - tcc:18597501 1065.83