Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00612 ATGGTTGCAAAAGCCATGGCTGCGACTTCGCGTGAAAACCTCGCAAGTCTCATCCACTCAGCCAAATTGGCCATTGACATACCTTCAAAGCTCGACTCATTGCGCAAATTGAAGACCGAACTTCCTCAAGAAGATCCTGTTATTCTCACTGAGTTCCTCCCTCCGCTCTTCGACTTCCTCTCAGATCGCTTCAGTCCTGTTCGCAAATTTGTCACCGAGATGATTGGGGAAATTGGATTGATGAACACTGAGTTTTTGCCTGATATTGTGCCTGTGTTGATTGATGTTTTGGATGATGATACGCCGGCCGTTGTTCGCCAAGCTATACTGTGTGGAATCGATTTGTTTCGTTACACACTAGAGAAAATCGCGGTTCAGGGTCTATATTCTAGTGATTTAGACAGCGCAATTGAATCTGCTTGGGAGTGGATGGTTAAATTCAAAGACAGAGTATACTCGATAGCATTTCAAAATGGAAGGGGTGGAGCAAAGCTGCTGGCATTGAAGTTTGTTGAAGCAGTTATTCATCTTTACACACTTGATCCTAATGGTTCCACAGAACCCACTTCTCATCAAGGAAAACCACCGCTATTTAATATCTCATGGCTGAGGCGGGATCATCCTGTACTTAACATTGGAGATTTGTCGATGGAAGCCAGTCATAATTTGGGTCTCTTGCTTGATCAACTTAGGTCTCCAACTGTGAAGGCTCTTAGTAACTCAGTAATCATTGTGCTGATTAAAAGCCTTTCAGCAATTGCTATAGACAGGCCTGCATTCTATGGTCGCATCTTGCCAGTTTTGCTCAGTTTGGAACCCTCAAGCTCTGTTGTTAATGGGGTCTGTGTGTCTGCGGCACATCTTGCCCTAAAGAAGGCCTTTCTTACGTGCACGAAATGTACACATCCAAGTGCTGCCCCGTGGAGAGAACGTTTGGCAGGTGCCTTGAAGGAAATGCAGTCTGAAGGGAAGGCAGATCAGGTGTTCCAGCCAATCTCTGCAAGTAATGGAAGTACATTACCAAGCGAGGATTATCAACCAGTTATCAAGGAAGAGGATGCTGCAGTAAGTTTGTTTGATTCAGGGCACATTCATTTCGGAAGAAAACGATCAGGATCACCAAATGGAAGTGACTTAGCTGAAGATGCAGATGTTCCTGGAAAACGTGTTAGAACAACAGCTGATGGTTTACAACATAAACCTAAAATGGAATTAGATGAAGGTACTGCTAACACACAGGATGACACTCCTTCGACTGCACCAGCATCTTCAAAAGGAGATGCGGATAATGGGCCTGTACAGCAGCTTGTTGCCATGTTTGGTGCTTTGGTTGCTCAAGGTGAAAAGGCTGTTGCATCTTTGGAAATTCTTATCTCAAGTATTTCTGCTGACTTACTAGCTGAGGTGGTGATGGCAAATATGCGTTATCTACCTCCAAATTGCCCTAATGCTGAAGGAAATGACGAACAGTTGCATGACATTAGTATATTTGGTTCTCATGACAAGGCTAAATACCCACAATCATTTGTGGCTGGTGTTATGTCACTTTCTAGTACTTTCCCGCCTGTTGCTTCACTTCTTGATGCTCGTCAATCAGTGTCCAATGTTCATCAATCAGTGTCCAATGTTCATCAATCAGGGTCCAATGTTCATCAATCAGTGTCCAATGATTTAGTGAAGTCTCACGGGGAGGATGGAATTTCTTCAACTGGAGTAGATAGTAGTGTTATGCATTCTGGCATGATTCTTTCATCTCAAAATGCACCATCGCCTACTGATTTTCCATCTTCTGATACTTGTATACCTGGAATGGAGAATCTCAGTACAACTCTGCCTTGTGACATAGATGACATTGGCAACTTAGAGAGTGGAATCCCTGGCCTGGATTCTTTTGGTCGAAATGATGCATTGTCAGAAACTTTGGCTGCTCCCTCATTGGTTTCCACTGATATGCAAATAGAAGATGCCAGTCAAGAGCAAGTTACAAGTTTGGATAATAGCCCACCCTTGAGCTTAGTTCCATCAATATCCGCAGATAAATCTGAGGAGCTGAGCCCAAAAACAGTTGCTGCAGATGTCAATAGTTTGGTATCCTCAACAGCTACTTCAGTTGTGTTGCCTTCTCGTCTAGTCTTGCCAAAGATGATTGCTCCAGTCGTTGATCTTGCAGATGAACAGAAGGATCATGTGCAAATATCATGTTTTATGCGCATCATTGATGCATATAAGCAAATATCTGTAGCTGGAGGCTCAAAAGTTCGATTTTCAATACTTGCTTATTTAGGAGTTGAGTTTCCTTTGGAGTTAGACCCGTGGAAATTGTTACAAAAGCATATTTTGATTGATTACTCTAGTCATGAGGGACATGAGTTGACATTGCGTGTCCTCTACAGGTTATTTGGTGAGGCTGAAGTGGAGCCTGACTTCTTTTCTTCCACAACTGCAGCTTCTGTATATGAAACATTCCTCCTAACAGTGGCAGAAGCACTTAGAGATTCTTTTCCACCTTCGGATAAATCATTAAGTAAACTGCTCGGTGAATCTCCTTATTTGCCAAAATCAGTTTTAAAAATTTTAGAGAACATGTGTTCTCCTGGAAATGGGGATAAAGTTGGAAAGGAATCATACACATTGAATGCGGATAGAGTTACTCAAGGTCTAAGTGCTGTATGGAGTTTGATTCTTCTAAGGCCTCCCATTCGGGATACTTGCTTAAAAATTGCTTTACAGAGTGCAGTGCATCACTTGGAAGAAGTGCGCATGAAAGCAATACGTCTGGTAGCAAATAAACTTTATCCTTTATCATCAATTTCTAAGCAAATAGAAGATTTTGCTAAGGAAATGATGTTCTCAGTGATGAGTAGTGATGCTTCTGAAGCTACAGATGCTGAAGGGTCCATTGCTGATTCACAAAAGGGACGTGATATTGAAAAGCTTGCAAATGAACCACTGTCTTTGAGTGGCAGTACTAAGGAAGTCTCAGATAATCGGCCACCAAGCTCATCTGAGGCTACCTCACTACTTTCAGTTTCTGAGGCTCAGAGGGGCATGTCATTGTATTTTGCTTTGTGCACAAAGAAACACTCCCTCTTTCGCGAAATATTTGTCATCTATAGAAACACATCAAAAGCAGCAAAACAGGCTATTCATCGTCAGATTCCCATACTAGTTCGTACATTGGGTTCATCTTCAGTTCTCCTTGAAATTATATCAGATCCCCCAAATGGAAGTGAGCATCTCCTAATGCAGGTGTTGCATACACTTACTGATGGTACAATCCCTTCTAAGGATTTAATATTTACTGTGAAAAGGTTACATGATTCAAAACTTAAGAATGCAGAGGTTCTTATTCCAATATTGCCATTCCTACCGAAAAATGAGGTAATGCCGGTTTTTGCCAACATTGTTAAGATGCCTTTTGAGAAGTTTCAAGAAGCACTTGGTCGCATATTGCAGGGATCATCACAATCTGGTCCGGTGCTTACACCAGCCGAAATATTAATTGCTATTCATGGAATTGATCCTGAAAGAGATGGAATTCCCTTAAAAAAGGTAACTGATGCGTGCAATGCTTGCTTTGACAAGCGACAAACTTTTACCCAAGAAGTTCTTGCCAAAGTTTTGAATCAATTGGTTGAGCAGATTCCTCTTCCTTTATTGTTCATGCGTACGGTATTACAAGCAATAAGTGCTTTTCCAACATTGGTGGACTTTATTATGGGGATTCTCGCCCGCCTTGTGAAGAAGCAGGTATGGAAACAACCCAAGCTGTGGGTGGGATTCGTGAAGTGTTTGCAATTGACAAAACCTCAGTCATTTGGTGTTTTGCTTCAGCTACCTCCACCACAATTGGAAGCTGCATTAAATAAAGTTGCTGCACTGAAGGCACCATTGATTGCTCATGCTAGCCAGCCAGATATACAATCTTCACTTCCCAGGTCTGTGCTGGTCGTTCTTGGCATCGTTTCCGATTCTCAGGTTTCAAGTCATCCAGCCATCGTTTCCGATTCTCAGGTTTCAAGTCATCCAGCCATCGTTTCCGATTCTCAGGTTTCAAGTCAGGCAGGCATTGTTTCCGATTCTCAGGTTTCAAGTCAGCCAGGTATTGTTTCCGATTCCCAGGTTTCAAGTCAGCCAGGCATTGTTTCTGATTCCCAGGTTTCAAGTCAGCCACAAACTAGCCAAACACAGACAGTTGAGACAAGCAACTCAGATAAGGACACAACGACTGAAAAATCCCAAGAACCGTCTGCAGCGAGTTAA 4263 0.4248 MVAKAMAATSRENLASLIHSAKLAIDIPSKLDSLRKLKTELPQEDPVILTEFLPPLFDFLSDRFSPVRKFVTEMIGEIGLMNTEFLPDIVPVLIDVLDDDTPAVVRQAILCGIDLFRYTLEKIAVQGLYSSDLDSAIESAWEWMVKFKDRVYSIAFQNGRGGAKLLALKFVEAVIHLYTLDPNGSTEPTSHQGKPPLFNISWLRRDHPVLNIGDLSMEASHNLGLLLDQLRSPTVKALSNSVIIVLIKSLSAIAIDRPAFYGRILPVLLSLEPSSSVVNGVCVSAAHLALKKAFLTCTKCTHPSAAPWRERLAGALKEMQSEGKADQVFQPISASNGSTLPSEDYQPVIKEEDAAVSLFDSGHIHFGRKRSGSPNGSDLAEDADVPGKRVRTTADGLQHKPKMELDEGTANTQDDTPSTAPASSKGDADNGPVQQLVAMFGALVAQGEKAVASLEILISSISADLLAEVVMANMRYLPPNCPNAEGNDEQLHDISIFGSHDKAKYPQSFVAGVMSLSSTFPPVASLLDARQSVSNVHQSVSNVHQSGSNVHQSVSNDLVKSHGEDGISSTGVDSSVMHSGMILSSQNAPSPTDFPSSDTCIPGMENLSTTLPCDIDDIGNLESGIPGLDSFGRNDALSETLAAPSLVSTDMQIEDASQEQVTSLDNSPPLSLVPSISADKSEELSPKTVAADVNSLVSSTATSVVLPSRLVLPKMIAPVVDLADEQKDHVQISCFMRIIDAYKQISVAGGSKVRFSILAYLGVEFPLELDPWKLLQKHILIDYSSHEGHELTLRVLYRLFGEAEVEPDFFSSTTAASVYETFLLTVAEALRDSFPPSDKSLSKLLGESPYLPKSVLKILENMCSPGNGDKVGKESYTLNADRVTQGLSAVWSLILLRPPIRDTCLKIALQSAVHHLEEVRMKAIRLVANKLYPLSSISKQIEDFAKEMMFSVMSSDASEATDAEGSIADSQKGRDIEKLANEPLSLSGSTKEVSDNRPPSSSEATSLLSVSEAQRGMSLYFALCTKKHSLFREIFVIYRNTSKAAKQAIHRQIPILVRTLGSSSVLLEIISDPPNGSEHLLMQVLHTLTDGTIPSKDLIFTVKRLHDSKLKNAEVLIPILPFLPKNEVMPVFANIVKMPFEKFQEALGRILQGSSQSGPVLTPAEILIAIHGIDPERDGIPLKKVTDACNACFDKRQTFTQEVLAKVLNQLVEQIPLPLLFMRTVLQAISAFPTLVDFIMGILARLVKKQVWKQPKLWVGFVKCLQLTKPQSFGVLLQLPPPQLEAALNKVAALKAPLIAHASQPDIQSSLPRSVLVVLGIVSDSQVSSHPAIVSDSQVSSHPAIVSDSQVSSQAGIVSDSQVSSQPGIVSDSQVSSQPGIVSDSQVSSQPQTSQTQTVETSNSDKDTTTEKSQEPSAAS 1420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00612 1420 MobiDBLite consensus disorder prediction 986 1007 - -
Vivi5g00612 1420 MobiDBLite consensus disorder prediction 1356 1404 - -
Vivi5g00612 1420 Pfam Symplekin tight junction protein C terminal 1113 1290 IPR022075 -
Vivi5g00612 1420 MobiDBLite consensus disorder prediction 367 430 - -
Vivi5g00612 1420 MobiDBLite consensus disorder prediction 324 343 - -
Vivi5g00612 1420 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN-RELATED 1 1339 - -
Vivi5g00612 1420 MobiDBLite consensus disorder prediction 410 430 - -
Vivi5g00612 1420 Gene3D - 1 336 IPR011989 -
Vivi5g00612 1420 MobiDBLite consensus disorder prediction 1356 1420 - -
Vivi5g00612 1420 SUPERFAMILY ARM repeat 45 1248 IPR016024 -
Vivi5g00612 1420 MobiDBLite consensus disorder prediction 382 409 - -
Vivi5g00612 1420 MobiDBLite consensus disorder prediction 326 343 - -
Vivi5g00612 1420 SUPERFAMILY ARM repeat 37 271 IPR016024 -
Vivi5g00612 1420 Pfam Symplekin/PTA1 N-terminal 102 320 IPR032460 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00612 Vivi-Chr5 11150400 11167601 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00612 K06100 - gmx:100779360 1975.29