Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00605 ATGGCCACATTGTTTTTATCAGAATGTGGCTTAAGGCCACTTCCTGTACTGTACACCCAACCTAGAACAAGTGCAATTTCATCTCATAAACCTCCAAAGTTTGGATTTTTAAGCAAAACAAACAAAAGGGTATCTTTAGATCTTGGGTTTAAGGCAAGAAAGTGGGAGTTGAAAGTGAGTGCTCCTTTGAGAGTTAGTACTGAGGAAGAAGAAGAGGGTGTGAGGGAGTTGCCAGAATTTGACCCTGGTGCACCACCTCCTTTTACATTGGCTGATATAAGAGCAGCTATACCTAAACATTGTTGGGTTAAGGATCCTTGGAAGTCTATGAGTTATGTTGTGAGAGATGTTGTTGTGGTTTTGGGTTTGGCTGTTGTTGCTGCTTATGTTAATAGTTGGTTTGTTTGGCCTCTTTATTGGGCTGCTCAAGGGACTATGTTTTGGGGTCTCTTTGTTCTTGGTCATGATTGTGGTCATGGAAGCTTTTCAAACGATCCAAAGCTGAATAGTGTTGCAGGGCATTTGCTGCATTCTTCAATCCTAGTACCATATCATGGATGGAGAATTAGTCATAGAACACATCACCAAAATCACGGCCACGTTGAAAATGACGAATCTTGGCACCCATTGCCGGAGAAAATCTTCAAGAGCTTGGATAAAGCAACGAAAATTTTAAGATTTACAATACCTTTTCCAATGCTTGCATATCCTTTCTACCTTTGGAGTAGGAGTCCGGGGAAGAGTGGCTCTCACTTTGATCCAAACAGTGACTTGTTTGTCCCAAATGAAAGAAAAGATGTTATTACTTCAACTGTTTGTTGGACAGCTATGGCTGCTTTGCTTGTAGGATTAGGATTCGTTATGGGTCCAATTCAATTACTTAAGCTTTACGGCATTCCTTATATGCTTTTCGTCATGTGGTTGGATTTGGTGACTTATTTGCATCACCATGGTCACGAAGACAAATTACCATGGTATCGTGGACAGGAATGGAGCTACCTAAGAGGCGGACTTACAACTCTTGATCGTGACTATGGATTGATAAATAACATCCATCACGACATCGGAACTCATGTCATTCATCACTTGTTTCCTCAAATCCCACACTACCACTTAATAGAAGCTACCGAGGCAGCGAAACCAGTTCTTGGAAAATACTACCGGGAGCCGAAGAAATCATCGCCTTTACCATTTCACCTAATTGGAGAGTTAATAAAAAGCATGAAGAAAGACCATTATGTCAGTGACACTGGTGATATTGTTTACTACCAAACAGACCCTAACCTTAGTGGCTCTTCTACATCAAAATAA 1311 0.4096 MATLFLSECGLRPLPVLYTQPRTSAISSHKPPKFGFLSKTNKRVSLDLGFKARKWELKVSAPLRVSTEEEEEGVRELPEFDPGAPPPFTLADIRAAIPKHCWVKDPWKSMSYVVRDVVVVLGLAVVAAYVNSWFVWPLYWAAQGTMFWGLFVLGHDCGHGSFSNDPKLNSVAGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLPEKIFKSLDKATKILRFTIPFPMLAYPFYLWSRSPGKSGSHFDPNSDLFVPNERKDVITSTVCWTAMAALLVGLGFVMGPIQLLKLYGIPYMLFVMWLDLVTYLHHHGHEDKLPWYRGQEWSYLRGGLTTLDRDYGLINNIHHDIGTHVIHHLFPQIPHYHLIEATEAAKPVLGKYYREPKKSSPLPFHLIGELIKSMKKDHYVSDTGDIVYYQTDPNLSGSSTSK 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00605 436 Pfam Fatty acid desaturase 133 387 IPR005804 GO:0006629
Vivi5g00605 436 CDD Delta12-FADS-like 104 372 - -
Vivi5g00605 436 Pfam Domain of unknown function (DUF3474) 1 124 IPR021863 GO:0016717
Vivi5g00605 436 PANTHER OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC 76 425 IPR012171 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00605 Vivi-Chr5 11073734 11077112 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g00605 1 432 Lipid Metabolism Gene Families AT3G11170 72.851 0.0 666
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00605 K10257 - gmx:100217335 754.207