Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00597 ATGAAAGCCTTCACAAGTTTTAGTTCAAAACCAATAAACCTTAAGCTAGGATCTTTGTCTCCTAGAGTTGGTTTTCATGTTTCTGATAAACCCTTTTCTTGCTTCACTTTTCTCTCTAGAAATGAACAAAAAGGGTCCATTTATTGTGTTTTGAAAGTTGTTCAAAACAAGGGTTTTTACCCTCTTCATGCTGTGCCATCAGAACATCAGCAAGAGGTTGAGTTGGAAGATGTTGAGCCTCAAGTTCAACAAAGTGAACAAACAAACGTATCAAAGTTTGTTCGTGTCGAATTTCAGCTACTAAAAGATTGTGACTTCGGGGAACAGTTTCTAATAGTTGGAGACGATCCTATGCTTGGTTCATGGAATCCCTTAGATGCATTACTAATGACATGGTCTGATGGCCATATATGGACTCTCGAGCTGGATATGCCGGCCGGAAAATCGATCCAGTACAAGTTCATACTAAAGGGAATAGAAGGTGATATTATTTGGCAGCCGGGTTCGGATCGGGTTATTCAAACATGGGAAACTATGAACAGAATAATTGTTAGTGAGGATTGGGAGAATGCAGAACTTCAGAAAGTAGTAGAGGAAGATCGATTTTCTCGACCAAATGAAGAACCTCAAGTTCTATCAGACGTGTCAACTTCTACTGAAACAGCAGATGATTCTCGAGATAAAACGGAGTTCGTTGTATCAAATGCATCTAATATTGAAGATACGCGAATTCATGGGGAGGAGAAACTGATTGATGAAGAAGTAATTCAGGAAAATATTGGTGATAGTATTTCTTCATCGATTGAGAAGCCAATGGCTATTATAGCAGAAAATATCGGTTCCTCGGAGAAACTCATGGGAAGTACTAGTCACAAAACGAGTAAAAGTAATGTGATTCAAAAAAATGAAGAATCGGAAGATGGTTCTCAAAAGGAGGATACAATACGTTATAGCGGATACAACGGAAATGCTGCAGCACTAAACAATCAAGAAGGGACGATTGTGGAGGGAAGCTTAATCGACTTGAAAGGAGGTCCCGTTCTTGTACCTGGCTTAACGCCACCAACTGAAAAAGAAGCTGATCAAGGTGAAGTTGAAGAAGAAAAGATTGTGATAAAGTCTTCAATTGAAACTTTTGAAACACATGATCAGATTATACCAGAGTTGAGTAAGGATCAAGAATCAGATTATGACACAGCAGAGGAGATAAATACAACAATCAACGATGAGCTGAGTTTCCACGAGGAGCAGTTTCATTTAGCACCAAAACCGGAAGAAGTATTGAGCGCTGAGCCAATTCATGGTAACGCCTTGCGTAATGATGTGGAGTGGGGCCGCGAAACCGTCAAGAAGTTTTTAACGAAATTTGGATTGCTTTGA 1380 0.3957 MKAFTSFSSKPINLKLGSLSPRVGFHVSDKPFSCFTFLSRNEQKGSIYCVLKVVQNKGFYPLHAVPSEHQQEVELEDVEPQVQQSEQTNVSKFVRVEFQLLKDCDFGEQFLIVGDDPMLGSWNPLDALLMTWSDGHIWTLELDMPAGKSIQYKFILKGIEGDIIWQPGSDRVIQTWETMNRIIVSEDWENAELQKVVEEDRFSRPNEEPQVLSDVSTSTETADDSRDKTEFVVSNASNIEDTRIHGEEKLIDEEVIQENIGDSISSSIEKPMAIIAENIGSSEKLMGSTSHKTSKSNVIQKNEESEDGSQKEDTIRYSGYNGNAAALNNQEGTIVEGSLIDLKGGPVLVPGLTPPTEKEADQGEVEEEKIVIKSSIETFETHDQIIPELSKDQESDYDTAEEINTTINDELSFHEEQFHLAPKPEEVLSAEPIHGNALRNDVEWGRETVKKFLTKFGLL 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00597 459 MobiDBLite consensus disorder prediction 285 314 - -
Vivi5g00597 459 Pfam Starch binding domain 94 180 IPR002044 GO:2001070
Vivi5g00597 459 CDD CBM20 95 188 - -
Vivi5g00597 459 ProSiteProfiles CBM20 (carbohydrate binding type-20) domain profile. 88 190 IPR002044 GO:2001070
Vivi5g00597 459 MobiDBLite consensus disorder prediction 297 313 - -
Vivi5g00597 459 PANTHER STARCH-BINDING DOMAIN-CONTAINING PROTEIN 1 89 190 - -
Vivi5g00597 459 MobiDBLite consensus disorder prediction 200 228 - -
Vivi5g00597 459 SUPERFAMILY Starch-binding domain-like 90 184 IPR013784 GO:0030246
Vivi5g00597 459 SMART CBM_20_2 93 185 IPR002044 GO:2001070
Vivi5g00597 459 Gene3D Immunoglobulins 90 189 IPR013783 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00597 - - mtr:11422472 583.948