Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00588 ATGTTGTCTCAAAACCAAGCAGATGAAGCACTAGTGACACATCTCAATGAGACAGAACAAGAAGATAGAGAACAAGACCAATCGATGTCCAATTTCAAAAGCTTCTTATGGCATGGTGGTTCTGTTTGGGATGCATGGTTTAGTTGTGCTTCAAATCAAGTGGCTCAAGTGTTGTTAACACTGCCATATTCATTCTCTCAACTTGGTATGGTATCAGGCATTGTGTTTCAGATATTCTATGGCCTTGTTGGAAGCTGGACTGCTTATTTAATCAGTGTTCTCTATGTTGAGTATCGTGCAAGAAAGGAAAAGGAAAATGTTAACTTCAAAAACCATGTCATCCAGTGGTTTGAAGTTCTTGATGGGTTACTAGGAAAATATTGGAAAGCTTTGGGGTTAGTCTTCAATTGTACTTTCCTTCTATTTGGGGCTGTCATTCAGCTTATAGCATGTGCAAGTATTATATATTACATAAATGATAAATTGGACAAAAGAACATGGACATATATATTTGGAGCATGTTGTGCTACAACAGTTTTCATACCATCTTTCCATAATTACCGTATTTGGTCATTTCTTGGTCTTGGAATGACTACTTACACTGCTTGGTATCTTGCTATAGCTGCTATAATTAATGGCCAGATAGAAAATGTGGTACACTCTGGTCCAACAAAGCTGGTATTGTACTTCACAGGAGCCACTAACATACTCTACACTTTTGGTGGACATGCTGTCACTGTGGAGATTATGCACGCCATGTGGAAACCTCAAAAGTTTAAGTACATATATTTTTTGGCAACATTGTACGTTTTTACGTTAACGATTCCTTCTGCTGTTGCCGTTTACTGGGCTTTCGGTGACGAACTGCTAAACCACTCCAACGCTTTATCTCTTCTTCCTCAAAGCGGATTCCGTGATTCCGCCGTTATCCTCATGCTCATTCATCAGTTTATCACATTTGGATTTGTATGTACTCCACTGTATTTTGTATGGGAGAAGGCAATTGGAATGCATGAGACTGATAGTATTTGTTTGAGGGCATTGGTAAGATTACCAGTTGTGATACCAATTTGGCTTTTGGCTATAATATTTCCATTCTTTGGACCCATAAATTCAGCTGTTGGGGCCTTACTTGTTAGCTTTACTGTCTACATCATTCCTGCCTTAGCCCATATGCTTACTTATAGAACAGCTTCTGCAAGACAGAATGCTGTTGAGAAACCTCCTTTCTTCCTACCAAGTTGGACAGCTGTATATGTCATGAATGCATTCATAGTGGTATGGATTTTTGTGGTTGGATTTGGGTTTGGAGGATGGGCCAGCATGATCAACTTCATAAAACAAATTGACACTTTTGGGATTTTTGCTAAATGCTACCAATGCCCACATCCAACACCATCCCAATCACCACCCCCTCTTTGGTTTCCGGATTAA 1434 0.3947 MLSQNQADEALVTHLNETEQEDREQDQSMSNFKSFLWHGGSVWDAWFSCASNQVAQVLLTLPYSFSQLGMVSGIVFQIFYGLVGSWTAYLISVLYVEYRARKEKENVNFKNHVIQWFEVLDGLLGKYWKALGLVFNCTFLLFGAVIQLIACASIIYYINDKLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLAIAAIINGQIENVVHSGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYFLATLYVFTLTIPSAVAVYWAFGDELLNHSNALSLLPQSGFRDSAVILMLIHQFITFGFVCTPLYFVWEKAIGMHETDSICLRALVRLPVVIPIWLLAIIFPFFGPINSAVGALLVSFTVYIIPALAHMLTYRTASARQNAVEKPPFFLPSWTAVYVMNAFIVVWIFVVGFGFGGWASMINFIKQIDTFGIFAKCYQCPHPTPSQSPPPLWFPD 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00588 477 Pfam Transmembrane amino acid transporter protein 38 430 IPR013057 -
Vivi5g00588 477 PANTHER OS05G0424000 PROTEIN-RELATED 28 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00588 Vivi-Chr5 10662668 10676902 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g00588 3 461 Organic Solute Cotransporters AT2G21050 77.124 0.0 749
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00588 K13946 - gmx:100778463 840.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g02165 6 96550886 96564274 Vivi5g00588 5 10662668 10676902 PCT