Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00540 ATGAATATCAAGAGCAAAGAAGATTTCTGGATGTTTTACATGAACCATCATTCAAAGCCTTCAACAAGGAAATGGCACTTCATAGGCACACTTTTGAGCATAATCTTGTTTCTATGTTCAATAATCTTCACTTGCTGGTTCTTGTGTCTTGTTCCTTTGTCTGCTTATGGATTTTCTATGTATAGTCATTTGTTCATTGAAGGGTGTTTTCCTGTGACTGTTGGGTACCCCTTTTGGTCTCTTTATTGTGATTTTAAGCTGTTTTGGTTTATGATTACTGGAAAGATGGACAGAGAGATGAAAAGACTTGGAAAGAGACCTGTGTTGCAACTCTACTGA 339 0.3687 MNIKSKEDFWMFYMNHHSKPSTRKWHFIGTLLSIILFLCSIIFTCWFLCLVPLSAYGFSMYSHLFIEGCFPVTVGYPFWSLYCDFKLFWFMITGKMDREMKRLGKRPVLQLY 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00540 112 Pfam 2-hydroxy-palmitic acid dioxygenase Mpo1-like 4 96 IPR009305 -
Vivi5g00540 112 PANTHER TRANSMEMBRANE PROTEIN 1 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00540 Vivi-Chr5 8895141 8895948 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00540 - - qsu:112039740 172.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g02122 6 95315418 95317033 Vivi5g00540 5 8895141 8895948 PCT