Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00539 ATGATTGCTCTCAAAACCATATTTCTCCCTTCTTTCTATCTTTCTACCAACACCTCCACTTTTACTACTCTGCACCACCCTCACAGCACAGCAAGAAGAAGTTCTGTGTTTCTGTGTCTCTGCAGCCCCACCAACAACTCCAATGATGAATCTGATAGTAATTCAAAGCCTGAAGGTGATGTTCAAAGCCAAGAGTTATTGGCTCAAATTGCAATGATTCAGACACAAAAAGTTCGTCTTACGGATTTTTTGGATGAGAGATCTGAATATTTGACACAGTTTGGTGAAGAAGCTAAGGCTGAGATTGATAAGATTGGTGAAGATGCTCTTCAAGGATTGGATGAAGCTAGTGATAGAATAACGGCAAACATAGAAAGTCAGATGCTAGCATTTGAGGAATTTAATGAACTAAACAAACAAGAGATTGAGGAGAGTGAAAGCAAAGTAATGGAAATCGAAGGTCAAATGGAAGTTGACAGAAATGAAGGAATGTTCTTCAAGAGCTTAGGACAGAAAGGGTCTAATGTTGATAAAGCAAAAGCTAAACAAGAAGTGGAAAAAATGAAAGATGAAACAAAAGAGAAAAATGGAAGAAAAACAATGAAAAATGTTTCCTTATTCTTCATTGGACTTTTGACTTATGGAATAGTTGGTTCTATTAATTTCTCATCTTTAAGTAGTACTGATTGGAAAAGAGTTGTAGTTCTTGGTGCTATTCTTGTGGCTTTGTTTTCTCAGTTCATTTATGAACAAAATAAAGATAACAATCAGAAAGATGATGAACAATGA 789 0.3574 MIALKTIFLPSFYLSTNTSTFTTLHHPHSTARRSSVFLCLCSPTNNSNDESDSNSKPEGDVQSQELLAQIAMIQTQKVRLTDFLDERSEYLTQFGEEAKAEIDKIGEDALQGLDEASDRITANIESQMLAFEEFNELNKQEIEESESKVMEIEGQMEVDRNEGMFFKSLGQKGSNVDKAKAKQEVEKMKDETKEKNGRKTMKNVSLFFIGLLTYGIVGSINFSSLSSTDWKRVVVLGAILVALFSQFIYEQNKDNNQKDDEQ 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00539 262 PANTHER 8-AMINO-7-OXONONANOATE SYNTHASE 1 261 - -
Vivi5g00539 262 MobiDBLite consensus disorder prediction 177 196 - -
Vivi5g00539 262 Coils Coil 178 198 - -
Vivi5g00539 262 Coils Coil 135 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00539 Vivi-Chr5 8886140 8888408 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00539 - - mtr:11412574 417.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g02135 6 95756234 95757268 Vivi5g00539 5 8886140 8888408 PCT