Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00486 ATGAAAATGCCATCTTTTCTAGATTCTTTACCTCAACGTTCATTCTTCTTTTGCTTCCTCCTTCTTCCTCTTTTGCTTTTACTCTTGCTCTTAGTACCACCTTCATCTTCTTCTTCATCTTCTTCTACCTCTTCAACAACTTCTTCTAATAAAGTAACCATGTCTATCTACTATGAAAGTTTGTGTCCTTATTGTGCTGATTTCATAGTGAATCATCTTGTCAAACTCTTCCAAACAAATCTCATCTCCATTGTCAATCTTAGATTCATCCCTTGGGGTAATGCTTTGATTGCACCTGATGGCACTTTTGATTGTCAGCATGGAAATGATGAATGCTTTCTAAACACAATCGAAGCATGCACTATTAAAATATATCCTGATGCGGCACAACATTTCAAGCTTATACACTGTTTGGAGCGTCTCACCTTAGAAAATCGTCATAAAGAATGGTTTAACTGCTTCCAAATGACTGGCTTGAGCACAATGCCTATTGATTGCTACAAAAATGGCAATGGAAAATCTATTGAACAAAAATATGCTAAAGAAACAGCTGAGCTTAATCCTCCTCATAATTTTGTTCCATGGGTGGTTATCAACAATCAAGCACTCAAAGAGGACTACTTAAATTTTGTGGCATATATTTGCAAAGCATACAAGGGAAATTTGAAACCAGATGCTTGTAGATCAGTTTCAACAAGAACTTATTATGATTCAGATGCAAAATTCAACTCAATTCATCATGTTTGTTATGTAGATGAAGCCAACAAAAATCTCACCTTACTTGCTACTAATCACCAAATTAAGGTGTAA 810 0.3543 MKMPSFLDSLPQRSFFFCFLLLPLLLLLLLLVPPSSSSSSSSTSSTTSSNKVTMSIYYESLCPYCADFIVNHLVKLFQTNLISIVNLRFIPWGNALIAPDGTFDCQHGNDECFLNTIEACTIKIYPDAAQHFKLIHCLERLTLENRHKEWFNCFQMTGLSTMPIDCYKNGNGKSIEQKYAKETAELNPPHNFVPWVVINNQALKEDYLNFVAYICKAYKGNLKPDACRSVSTRTYYDSDAKFNSIHHVCYVDEANKNLTLLATNHQIKV 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00486 269 Pfam Gamma interferon inducible lysosomal thiol reductase (GILT) 54 156 IPR004911 GO:0016671
Vivi5g00486 269 SUPERFAMILY Thioredoxin-like 17 200 IPR036249 -
Vivi5g00486 269 PANTHER GAMMA-INTERFERON INDUCIBLE LYSOSOMAL THIOL REDUCTASE GILT 33 251 IPR004911 GO:0016671
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00486 Vivi-Chr5 8202379 8204501 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00486 K08059 - gmx:100800176 353.214