Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00485 ATGTCTTCCATAAATTTCAACCCATTCAGTGGAAACTGGTTCCCATTCTCAAAACCACCAAACCCACTCCCTCTCCCTCCTCTCACCACTCTCTTCAATCTCTCCCAATCTCCCTCCAATTTCGCATCAACCTCTCTCTCCACCACCACCACCACCACCACCACCGCCGCAACCACCGCCGTCACCGATGACGAAGACCAACCCGGTCCATTCACCAAAATGGTCCAACAATTCTTCTGGGAATGCGAGAATCTCCCCGACTACAGACACACACCGCAAGTCGAAAAAATCCTCAACGATAACCACGCGTTCGAACCAAACCCTAACGCGACGGAGCAAGAAATGAACGAGAATGAAGAGTTTATGGAAGCAATGAGGAACAATCCGGTTATGAAGTTTCTGAGGAGAGCTGAGTTTGTTGCTGATGAGATGCATGAGATTGAGATGAAGAAGAATGCGGAACCGTATAAGAGGGAAGATAGAGATGTTTGGAAGAAGGTGCCGAATGTTATTGGACTTGATGGAAGGCCGATGCCGAGGAAATCGCAGACGAGTTTGGATGCCAAAGAGAAGTTTTGGGATTTTGCTAGACAGTTTTATCTTGGGATTTGGGGGTTTTGGCAACGGCCTTATCCTTCTGGGAGACCTATTGATGCTGCTCAAGCTATTGGATATAAGACGCTCGAGAGACGATACTATGATTTTATCATGAAGAGTGGTGTATGGTTCTATAAGGATCGGTTGGGTCGGACACGAGGGCCACTGGCATTGCATACGCTTAAAACTGCTTGGGGTGGTGGGGTTATTGATAAAAACACTTTCATTTGGGGTGAGGATATGGATGAATGGGCGCCCATCCATATGATTTATGGAATGGAGCGTGCAATCGCTACTTGGGAAGTTCGACTTGGAGCTTCAGCAACAGCTTTCTTTCATAAATTACAAAGAGGTATACCACCGTGGGTTCCTCTTAAGGGATTTGAAAAGAAGTCTTATAAGCAGCTTCAAGAAGAGGCGATAGAAAGCAAGAGGCGTGATTTGGCAGTGGTGGAAGCTAATGACGGCATGTGGCCCGGAGTTAGAATTCCAAGTCATGCCCTGTTTCTTTGGGCTAGTGGCTCTGAAATGACCCCTACTTTGGAACAGGATCACATGCCCAACAAGTACATTCCCAAAGATCTAAGACAACAGTTGGCAAAACTGATTCCAGGATTGAGGCCATGGGAAGTTCTGAGCATAGAACAAGCAATGGATCGCATAACATTCAACGGTGAATGGTACCGTGAACCGCTTGGTTCATACAACACAGGTCCGCCATACATCAGACGCTGGAATAAAGACGTGATGAGGTTTTATGAAGGGGCTGATAGCGTTTCTCGTCTAGCGCATGAAACATTCATGGCAAGATATCCTGGCTATGACAAAATTAGCAAAAAAGTCCTGCAGGATTTTAAAACAAGAATTGTGGAGATGAAGAAGAAGATGAAGGAAGAGCACCGCCTTAAAAAGCAGTTGGTTAGGGAGGAAAGGCGTAAAAAGTAG 1542 0.4617 MSSINFNPFSGNWFPFSKPPNPLPLPPLTTLFNLSQSPSNFASTSLSTTTTTTTTAATTAVTDDEDQPGPFTKMVQQFFWECENLPDYRHTPQVEKILNDNHAFEPNPNATEQEMNENEEFMEAMRNNPVMKFLRRAEFVADEMHEIEMKKNAEPYKREDRDVWKKVPNVIGLDGRPMPRKSQTSLDAKEKFWDFARQFYLGIWGFWQRPYPSGRPIDAAQAIGYKTLERRYYDFIMKSGVWFYKDRLGRTRGPLALHTLKTAWGGGVIDKNTFIWGEDMDEWAPIHMIYGMERAIATWEVRLGASATAFFHKLQRGIPPWVPLKGFEKKSYKQLQEEAIESKRRDLAVVEANDGMWPGVRIPSHALFLWASGSEMTPTLEQDHMPNKYIPKDLRQQLAKLIPGLRPWEVLSIEQAMDRITFNGEWYREPLGSYNTGPPYIRRWNKDVMRFYEGADSVSRLAHETFMARYPGYDKISKKVLQDFKTRIVEMKKKMKEEHRLKKQLVREERRKK 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00485 513 MobiDBLite consensus disorder prediction 42 68 - -
Vivi5g00485 513 PANTHER PROTEIN TIC 56, CHLOROPLASTIC 1 509 IPR037471 -
Vivi5g00485 513 Pfam GYF domain 2 242 288 IPR025640 -
Vivi5g00485 513 Coils Coil 333 353 - -
Vivi5g00485 513 Coils Coil 488 512 - -
Vivi5g00485 513 MobiDBLite consensus disorder prediction 42 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00485 Vivi-Chr5 8177419 8181847 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00485 - - tpra:123924798 750.355