Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00483 ATGGCTCTCTCTTCCAAACTCTCAATCTCAACCCTCTCTCCTTCACCTCTTCACGCTCAGAAGAAGAATCTCTCTTCTTCTTCTTCTTCTTCTTCCCTTAGCTTTGTTCTTTCATCTTCTTCAAAAACCAACAAGGTTTATGCTACTGCATCAAACTCATCAACAACACTCACTGGTGTCCTCTTTCAACCCTTTGAAGAAGTCAAGAAAGACTACCTTGCTACCCCCATTGCTCCCAACGTTTCTCTGGCCCGCCAGAATTTCAAGAACGAATCTGAAGCTGCCATCAATGAACAGATTAATGTTGAATACAATGTTTCGTATGTGTACCACTCTCTGTTTGCGTATTTTGACAGAGATAACATTGCTTTGAAGGGACTTGCTAAGTTCTTTAAGGAATCTAGTGAAGAGGAAAGAGAGCATGCTGAGAAGCTGATGAAATATCAGAATCTTCGTGGTGGAAGAGTTGTGTTGCATCCTATTGTGAGTCCTCCCTCTGAATTTGATCATGAAAAGGGTGATGCATTGTATGCTATGGAATTGGCACTGTCTTTGGAGAAGTTAGTGAATGAGAAGCTTTTGGATCTTCATGCTGTGGCTGATAGCAACAATGATCCTCAATTGGCTGATTTCATTGAGAGCGAGTTTTTGGATGAACAAGTTCAATCAATCAAGAAGATATCAGAGTATGTGACCCAGTTGAGATTGGTTGGAAAGGGTCATGGTGTGTGGCACTTTGATCAAGCTCTTCTTTGA 756 0.414 MALSSKLSISTLSPSPLHAQKKNLSSSSSSSSLSFVLSSSSKTNKVYATASNSSTTLTGVLFQPFEEVKKDYLATPIAPNVSLARQNFKNESEAAINEQINVEYNVSYVYHSLFAYFDRDNIALKGLAKFFKESSEEEREHAEKLMKYQNLRGGRVVLHPIVSPPSEFDHEKGDALYAMELALSLEKLVNEKLLDLHAVADSNNDPQLADFIESEFLDEQVQSIKKISEYVTQLRLVGKGHGVWHFDQALL 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00483 251 Gene3D - 54 251 IPR012347 -
Vivi5g00483 251 ProSitePatterns Ferritin iron-binding regions signature 2. 205 225 IPR014034 -
Vivi5g00483 251 PANTHER FERRITIN 65 251 IPR001519 GO:0006826|GO:0006879|GO:0008199
Vivi5g00483 251 SUPERFAMILY Ferritin-like 76 250 IPR009078 -
Vivi5g00483 251 ProSiteProfiles Ferritin-like diiron domain profile. 86 238 IPR009040 -
Vivi5g00483 251 FunFam Ferritin 55 251 - -
Vivi5g00483 251 Pfam Ferritin-like domain 94 236 IPR008331 GO:0008199
Vivi5g00483 251 ProSitePatterns Ferritin iron-binding regions signature 1. 137 155 IPR014034 -
Vivi5g00483 251 CDD Euk_Ferritin 90 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00483 Vivi-Chr5 8155179 8156980 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00483 K00522 - gmx:100778273 338.961
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g02281 6 101255536 101258384 Vivi5g00483 5 8155179 8156980 PCT