Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00482 ATGGATCAAATGTTCAGCAAGGTTGGATCGTATTGGTTCAACCAGAAAGCCAACAAAGAGCTTAATTCCGTCGGTGATGACATCAATTCAATATCAAACAGTATCGAAGGAGGAACCAAATGGCTAGTCAACAAAATAAAAGGAAAAATGCAGAAGCCATTACCAGAGTTGCTAAAGGAGTATGATCTACCAATAGGAATCTTTCCTCGTGACGCAACAAACTACGAATTCAACGAAGAGACGGGAAAGCTTGTGGTCTTTGTTCCTCAGGTATGTGAAGTAGGCTACAAGGATTCATCCGTCTTGCGTTTCTTCACCTCTGTGACCGGTTATCTGGAGAAAGGAAAGCTAGCAGACATAGATGGAATGAAGACAAAAGTTATTATCTGGGTAAAAGTGACGACCATTTTATCCGAAGGCTCGAAGCTCTATGTGACAGCTGGCATGAAGAAAACAAGGAGTAGGGAAGCATATGATGTTACAAGAGATGGTGTATCTGTAGAAAAGTTCTAA 513 0.4113 MDQMFSKVGSYWFNQKANKELNSVGDDINSISNSIEGGTKWLVNKIKGKMQKPLPELLKEYDLPIGIFPRDATNYEFNEETGKLVVFVPQVCEVGYKDSSVLRFFTSVTGYLEKGKLADIDGMKTKVIIWVKVTTILSEGSKLYVTAGMKKTRSREAYDVTRDGVSVEKF 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00482 170 SUPERFAMILY At5g01610-like 3 169 IPR036758 -
Vivi5g00482 170 Gene3D - 32 170 IPR036758 -
Vivi5g00482 170 Pfam Protein of unknown function, DUF538 56 158 IPR007493 -
Vivi5g00482 170 PANTHER T31J12.3 PROTEIN-RELATED 51 161 IPR007493 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00482 Vivi-Chr5 8106369 8109198 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00482 - - gmx:100500143 320.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g02283 6 101269689 101271829 Vivi5g00482 5 8106369 8109198 PCT