Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00479 ATGCCTCCAAATCCACCAAAATCTTCTATCCTCCTCCATAGAATCAACCACACCACCACTCCAACCGTCACCAACCACCATGATCCCCTCCCCGGCGAAAACACCAACACCACGCTCTTCGTCAACCCTGTCACCACCATCCCCAATACCATATCACACTACCACACACATCCCATAACCTCCAACCAACTATGCTCGGCGGTTGTCCAGGAAACAACCGCCTCCATCACCTCCGTTTGGTCCGTGGTTCGCCGCTTCGACAAACCACAGGCCTACAAAAACTTCATCAAAAGCTGTAATCTAATCAACGGCGACGGTGACGTGGGCACTCTCAGGGAGGTCAATCTTATATCCGGCCTCCCTGCCGCCCGCAGCACCGAACGCCTTGAGATCCTCAACGAGGATCAACATGTTATCAGTTTTAGCGTTGTTGGTGGAGATCATAGGCTTGCTAACTACCGGTCCGTTACTACACTTCATTCCTCCGGCGAAGGTGATAGCTCCGGCACGGTGGTTGTTGAGTCCTACGTGGTGGATATTCCTCCGGGGAATACAAAAGAAGACACTCGTGTGTTTGTTGACACAATTGTTCGGTGTAATCTTCAGTCACTCGCACAAACCGCTGAGAATATTACTCAACAAAACAACAACGATCTTTACAAGTGTTGTTCATAA 675 0.5007 MPPNPPKSSILLHRINHTTTPTVTNHHDPLPGENTNTTLFVNPVTTIPNTISHYHTHPITSNQLCSAVVQETTASITSVWSVVRRFDKPQAYKNFIKSCNLINGDGDVGTLREVNLISGLPAARSTERLEILNEDQHVISFSVVGGDHRLANYRSVTTLHSSGEGDSSGTVVVESYVVDIPPGNTKEDTRVFVDTIVRCNLQSLAQTAENITQQNNNDLYKCCS 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00479 224 CDD PYR_PYL_RCAR_like 68 209 - -
Vivi5g00479 224 PANTHER - 62 208 - -
Vivi5g00479 224 SUPERFAMILY Bet v1-like 67 207 - -
Vivi5g00479 224 Gene3D - 22 222 IPR023393 -
Vivi5g00479 224 Pfam Polyketide cyclase / dehydrase and lipid transport 69 209 IPR019587 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00479 Vivi-Chr5 8066819 8067946 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00479 K14496 - gmx:100788199 283.878