Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00461 ATGGACCACCCACCGCCGTTACCAAAAATCGCAATCTCCGGCGCAACACTCGCCTCTCTAATCCACCGCTTCTCCACCACCACTTCCTCAATCGAAGGCCTCCTCTTCGGCCACCTCACCTACGTCACCCCTCTCAACCTCACCGACGACTCCTCCGAAACTTCCCAAACCCTCCTCGCAACCGTCACCGGTTTCCTCACCTCCTCTTCCTTCCACGACACCTCCGGCAAAATCAACGCCTCCTCCGTCCGCCGTCTCATACCTAACTCCACCTCCCTCCTCGGCTGGTTCTCCGGTCGCCGCCGTACTCCCCTCCGTCCCTCCCTCCGCGAATTCTCCATCTCTTCCTCTCTCTCTTCTCTCTCCGAACTCTCTTCATCCATCAAACCCTCTCCATCTTCATCTTCATCTTCCCTCAATTTCAACCCTTGCTTGTTCTTCCTCCTCGCTTCCCCAATTTCCGATCAAACCTCTCACATTCACACTCACGATTACCGCGCTTACCAGTTCCTAACCGGAACGAATTCACTCAATCCGGTTTCGATCGATATTATCAACATCGGTCCGGCTTTTCGCGACCATTATGGATCATTCAGCCCTAACTCTCCGTTTCCTGCTCTTGATTGTCAGCTCGGCTACACGCCGATGGTACGCGATAATGAAGATGAGCGGCTGAATAAGATGAAACAGGCTTCTAAAGATCAGATGGAGTTGGATGCTTGTGTTGAGGGGCTTGAGGTTAGTAGGTTGAGTAAATTGATGGGCTCTGAGGCTAAGAATTATACTCAGAGTTTGGAAGATTTGTACCTTAAAATGCTTGTCAAGATTGAGAATTTGACTACCTTGGTTGAGCAGAGTTCGGCTAGGGTTCTAGAGCAGGAAAATCATAACAAGAAGTTGAGACAAAAAATTATGAGATCTGCTGCTGCAGAATAA 936 0.5021 MDHPPPLPKIAISGATLASLIHRFSTTTSSIEGLLFGHLTYVTPLNLTDDSSETSQTLLATVTGFLTSSSFHDTSGKINASSVRRLIPNSTSLLGWFSGRRRTPLRPSLREFSISSSLSSLSELSSSIKPSPSSSSSSLNFNPCLFFLLASPISDQTSHIHTHDYRAYQFLTGTNSLNPVSIDIINIGPAFRDHYGSFSPNSPFPALDCQLGYTPMVRDNEDERLNKMKQASKDQMELDACVEGLEVSRLSKLMGSEAKNYTQSLEDLYLKMLVKIENLTTLVEQSSARVLEQENHNKKLRQKIMRSAAAE 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00461 311 Coils Coil 283 303 - -
Vivi5g00461 311 PRINTS Protein family FAM175 signature 95 111 IPR023238 -
Vivi5g00461 311 PRINTS Protein family FAM175 signature 70 89 IPR023238 -
Vivi5g00461 311 PRINTS Protein family FAM175 signature 12 30 IPR023238 -
Vivi5g00461 311 PRINTS Plant protein family FAM175 signature 2 23 IPR023241 -
Vivi5g00461 311 PRINTS Plant protein family FAM175 signature 217 237 IPR023241 -
Vivi5g00461 311 PRINTS Plant protein family FAM175 signature 243 263 IPR023241 -
Vivi5g00461 311 PRINTS Plant protein family FAM175 signature 266 292 IPR023241 -
Vivi5g00461 311 PRINTS Plant protein family FAM175 signature 152 172 IPR023241 -
Vivi5g00461 311 PRINTS Plant protein family FAM175 signature 189 209 IPR023241 -
Vivi5g00461 311 PANTHER ABRAXAS FAMILY MEMBER 7 309 IPR023238 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00461 Vivi-Chr5 6910116 6913612 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00461 K20799 - gmx:100819642 340.117