Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00457 ATGTCCTCCTCCGCACCACCCGTTCTCCCCGTCGCCACCAACCCTCCTCCACCACCATCCACTGTCAGCACCGGATCCGACGCTCCCGTCAACTCCCCCGCCGTCCGCGTCCTCTTCAACAACCTCTCCGAGTCTCTCCGCCACGGCCTCGCCCTCCGCCGCCCCTGGACAGAACTCATCGACAGATCCGCCTTCTCCAAGCCTGAATCGTTCTCCGAAGCCACTCTCCGCGTCCGCAAAAACTACTCCTACTTCCGCGTGAATTACTACGCGATCGTCGCCGGGATCCTCGCCGTCTCTCTCCTCACGAATCCGTTCTCTCTCATCCTCCTCCTCGGCCTCCTCGCTTCCTGGACGTTTCTCTACCTCTTCCGTCCCTCCGATCGGCCTCTCGTTATTCTCGGCCGCACTTACACCGATTTCGAAACCCTAGCGATTCTCTCTGGACTCACTCTTATCGTTGTGTTTCTCACCAGCGTTGGTTCTGTTCTCGTCTCAGCTTTAATGCTTGGTGTTGCTGTTGTTTGTATTCATGGAGCATTCCGTGCACCGGAGGATCTTTTCCTTGATGAGCAGGAGAATTCTCAGGCTACCGGATTCCTATCATTCCTCCGCGCTCCTGCTGCAGTCGGCGTTCCTGCCGCCGCCGCACGCGTTTGA 660 0.5833 MSSSAPPVLPVATNPPPPPSTVSTGSDAPVNSPAVRVLFNNLSESLRHGLALRRPWTELIDRSAFSKPESFSEATLRVRKNYSYFRVNYYAIVAGILAVSLLTNPFSLILLLGLLASWTFLYLFRPSDRPLVILGRTYTDFETLAILSGLTLIVVFLTSVGSVLVSALMLGVAVVCIHGAFRAPEDLFLDEQENSQATGFLSFLRAPAAVGVPAAAARV 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00457 219 PANTHER PRENYLATED RAB ACCEPTOR 1-RELATED 24 193 IPR004895 -
Vivi5g00457 219 MobiDBLite consensus disorder prediction 9 23 - -
Vivi5g00457 219 MobiDBLite consensus disorder prediction 1 28 - -
Vivi5g00457 219 Pfam PRA1 family protein 50 192 IPR004895 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00457 Vivi-Chr5 6885803 6886922 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00457 K20359 - gmx:100804273 287.73