Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00455 ATGCCGTGCCTCAACCTCTCCACCAACGTCAACCTCGACGGCATCGACACCTCTTCCATCCTCTCCGAAGCCACCTCCACCGTCGCTAACATCATCGGAAAACCCGAGTCCTATGTGATGATTGTGCTGAAAGGATCAGTACCCATATCTTTTGGTGGGAATGAGCAGCCAGCAGCTTATGGAGAATTGGTGTCCATTGGCGGTCTTAACCCGGATGTGAACAAGAAACTTAGTGCTGCAATTGCCGCAATCCTCGAAACCAAGTTGTCCGTGCCTAAGTCACGCTTCTTCTTGAAATTCTATGACACCAAGGCCCATCAGAGTCAAGAATATGCACAGTGTTTGCATGCTTTACATCAGCAGTAG 366 0.4945 MPCLNLSTNVNLDGIDTSSILSEATSTVANIIGKPESYVMIVLKGSVPISFGGNEQPAAYGELVSIGGLNPDVNKKLSAAIAAILETKLSVPKSRFFLKFYDTKAHQSQEYAQCLHALHQQ 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00455 121 FunFam Tautomerase/MIF superfamily protein 1 109 - -
Vivi5g00455 121 Pfam Macrophage migration inhibitory factor (MIF) 2 107 IPR001398 -
Vivi5g00455 121 SUPERFAMILY Tautomerase/MIF 1 106 IPR014347 -
Vivi5g00455 121 Gene3D Macrophage Migration Inhibitory Factor 2 109 IPR014347 -
Vivi5g00455 121 PANTHER D-DOPACHROME DECARBOXYLASE 1 108 IPR001398 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00455 Vivi-Chr5 6881522 6883724 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00455 K07253 - qsu:112015170 226.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g02293 6 101531937 101535038 Vivi5g00455 5 6881522 6883724 PCT