Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00430 ATGCATTTCATCACTCTCTTCTTCTTCCTTTTCCTCTCTATCAACACCCTCACTTCTTCAACATCATCATCACACAATGAAGACACTTTAAATTTTGTTGGTCCTATAGACCGCAAGTTGTTAGGCATAAACAAGAAGGAAAAACTAAGTCATTTCAAATTCTTCTGGCATGACATTATGAGTGGAAAAAACCCATCTTCAATTATGGTTGTTCCACCAACATTAAACTCAACCACTGGTTTTGGTTTTGTCAACATGATTGACAACCCTTTAACATTAGGACCAGAATTGAGTTCCAAACTTGTTGGAAAAGCTCAAGGCTTCTATGCATCTGCTTCACAGGTTGAACTTGGTTTACTTATGGCTATGAATTTTGCTTTCATTGAAGGAAAGTATAATGGGAGTACTATTACTATCTTGGGGAGGAATCCGGTTTATGATAAGGTTAGAGAGATGCCTGTTATTGGTGGGAGTGGACTCTTCAAATTTGCTAGAGGGTATGCTCAAGCTAATACTCATTGGATTGATCTCAAATCTGGAGATGCTACGGTTGAGTACAATATCTATGTTTTTCATTATTGA 582 0.3729 MHFITLFFFLFLSINTLTSSTSSSHNEDTLNFVGPIDRKLLGINKKEKLSHFKFFWHDIMSGKNPSSIMVVPPTLNSTTGFGFVNMIDNPLTLGPELSSKLVGKAQGFYASASQVELGLLMAMNFAFIEGKYNGSTITILGRNPVYDKVREMPVIGGSGLFKFARGYAQANTHWIDLKSGDATVEYNIYVFHY 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00430 193 Gene3D - 38 189 IPR044859 -
Vivi5g00430 193 PANTHER NUCLEOPORIN-RELATED 37 189 IPR004265 -
Vivi5g00430 193 Pfam Dirigent-like protein 50 191 IPR004265 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00430 Vivi-Chr5 6408771 6409598 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00430 - - psat:127107764 300.441