Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00424 ATGTCATCCCAACATTTTCTCACTTTCTTCTTCTTCCTTCTCCTCTCTTGCAACACCATCACTTCTTCAACATCATCATCACAAAATGATGACACTTTCGACTTTGTTCGTCCAATAGATCGCAAATTATTAGGCCTAAACAAAATGGAAAAGCTAAGTCATTTAAAATTCTATTGGCATGACATAATGACTGGAAAAAACCCAACTTCATTCGCAGTTGTTCCATCACCTTTGAAGTTGAACTCAACCTTTTCTTTTGGTTTAGTCACCATGATGGATGACCCTTTGACTTTAGGACCCGAATTGAGTTCCAAACTTGTTGGAAAATGTCAAGGTTTGTATGCTTCTACATCACAGGATAGTTTTTCTTTTCTCATGGCTATGAATTTGGCTTTATTTGAAGGAGAGTATAATGGAAGTAGTATTACTATCATGGGGAGGAATCCTGTTTTTGATAAGGTTAGAGAGATGCCTGTTGTTGGTGGGAGTGGACTCTTCAGATTTGCTAGAGGCTATGCTCAACTTACTACTTATTCGTATGATCCCAAAAATGCAATTGCTGTTGTTGAGTACAATGTTTATGTTTCTCACTAA 594 0.3721 MSSQHFLTFFFFLLLSCNTITSSTSSSQNDDTFDFVRPIDRKLLGLNKMEKLSHLKFYWHDIMTGKNPTSFAVVPSPLKLNSTFSFGLVTMMDDPLTLGPELSSKLVGKCQGLYASTSQDSFSFLMAMNLALFEGEYNGSSITIMGRNPVFDKVREMPVVGGSGLFRFARGYAQLTTYSYDPKNAIAVVEYNVYVSH 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00424 197 PANTHER NUCLEOPORIN-RELATED 41 194 IPR004265 -
Vivi5g00424 197 Pfam Dirigent-like protein 53 195 IPR004265 -
Vivi5g00424 197 Gene3D - 42 193 IPR044859 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00424 Vivi-Chr5 6288241 6289173 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00424 - - psat:127107764 251.136