Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00416 ATGGATGAAAGAGAAGCTTTGAGAGAGAGTATTCTCTCTCAAGAACCAGAATTTCATTCTTCTTCTTCTTCTCTAATCTCTTATTTATACGTTGGCCACTTTTTAGCTAGATGGGGTTCCAGAATGTGGGAATTCTCTGTTGGTTTATATATGATAAGTATTTGGCCAGACTCGTTGTTGTATGCAGCAATATATGGTGCTGTTGAATCTGCTTCTATTGCTTTGTTTGGTCCAATTATTGGAAAATGGGTTGATAAGTTAACTTATCAGAAGGTTTTGAAATTGTGGCTGGTGACACAAAATCTATCGTTTATTATTGCCGGCGCCACCGTAGTTTCCTTACTTGTCTTCTCATCTTTGAAGTTTACAAATTTCCCACTTTTCTTACTTCTGGTGGTGATAATCAATATCTGTGGTGGCATTGGTGTACTTTCAACTCTTTCTGGAACTATCCTGATAGAAAGAGAATGGTTGTTGGTTATATCCGAAGGTCAACCGCCAGAGTTACTGACAAAGATGAATTCAGTTACGAGACGCATCGATCTAACATGCAAGTTACTTGCACCTGTTATAACTGGTTTCATAATAAGCTTTGTATCACTTAAAGCATCTGCTATAACACTAGCACTTTGGAATAGTGTTTCTGTTTGGGTGGAGTACTGGCTTTTTACATCGGTGTATAACGGGATTCCGGCTTTGCGTCAAAGTAGCCAAAGGAGAACGGAAAGGCTGTCGCAAAGCAATGTAGAAAGGACTAATTCAACTTCTGAGGGAGATAGTTTGCTTGTCGATACCAGTGATAGTTCGGAACCGGTAGATGGGAAAAGCAGGACGAAATTTTCCGAGTGGATTTCGAAAATCTCGTATGTCGATGCTTGGAGAGTTTATTTACGGCAAGAAGTTGTGTTTCCTGGACTAGCTCTGGCTTTGCTGTTTTTCACTGTACTCAGCTTTGGAACTTTGATGACAGCCACTTTAGAATGGGAAGGTATACCTGCATATGTTATTGGAATAGCGCGAGGAATAAGCGCTGTAATTGGAATCGCTGCAACCGTTTTATATCCTTTTCTGCAGCATCATATATCGGCTATTAGAACCGGACTTTGGTCCATCTGGTCTCAGTGGACTTGTCTACTACCTTGCTTAGCTGCAATTTGGATCCAAACCGGCACGTTTTCGTCATATATTTTGATGGGAAGTGTCGCAGTATCTCGGCTTGGGTTGTGGATGTTTGACTTATCTGTACTTGAACAAATGCAGAACCTTGTTCCTGAATCGGATCGTTTGATCGTTGGAGGTGTTCAGAATTCACTTCAATCCTTCATGGATTTATTAGCGTATGTTATGGGAATCATAATATCTGATCCAAAGGAGTTCTGGAAGTTGAGTTTGTTATCATTTCTGGCTGTCACATTAGCTGCATTCCTCTACTGCGTCCATGTGTTTCGCGTGCGGAAGCATATCTTTCACTTTGACAAACTAATCTGGTGTAATTCTTGTGCATGA 1506 0.4064 MDEREALRESILSQEPEFHSSSSSLISYLYVGHFLARWGSRMWEFSVGLYMISIWPDSLLYAAIYGAVESASIALFGPIIGKWVDKLTYQKVLKLWLVTQNLSFIIAGATVVSLLVFSSLKFTNFPLFLLLVVIINICGGIGVLSTLSGTILIEREWLLVISEGQPPELLTKMNSVTRRIDLTCKLLAPVITGFIISFVSLKASAITLALWNSVSVWVEYWLFTSVYNGIPALRQSSQRRTERLSQSNVERTNSTSEGDSLLVDTSDSSEPVDGKSRTKFSEWISKISYVDAWRVYLRQEVVFPGLALALLFFTVLSFGTLMTATLEWEGIPAYVIGIARGISAVIGIAATVLYPFLQHHISAIRTGLWSIWSQWTCLLPCLAAIWIQTGTFSSYILMGSVAVSRLGLWMFDLSVLEQMQNLVPESDRLIVGGVQNSLQSFMDLLAYVMGIIISDPKEFWKLSLLSFLAVTLAAFLYCVHVFRVRKHIFHFDKLIWCNSCA 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00416 501 CDD MFS_SLC40A1_like 31 480 IPR009716 GO:0005381|GO:0016020|GO:0034755
Vivi5g00416 501 PANTHER SOLUTE CARRIER FAMILY 40 MEMBER 18 484 IPR009716 GO:0005381|GO:0016020|GO:0034755
Vivi5g00416 501 MobiDBLite consensus disorder prediction 244 275 - -
Vivi5g00416 501 Pfam Ferroportin1 (FPN1) 25 470 IPR009716 GO:0005381|GO:0016020|GO:0034755
Vivi5g00416 501 MobiDBLite consensus disorder prediction 244 269 - -
Vivi5g00416 501 SUPERFAMILY MFS general substrate transporter 27 487 IPR036259 -
Vivi5g00416 501 Gene3D MFS general substrate transporter like domains 20 481 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00416 Vivi-Chr5 6115466 6118890 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g00416 28 500 Organic Solute Cotransporters AT2G38460 59.874 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00416 K14685 - gmx:100802561 791.571