LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi5g00414	ATGCCGTTATCGAAGTACCTTATACGGAACGAGTACAGCTTGGCGGATCCCGAGCTGTACCGCGCCGCCGATAAAGATGATCCCGAAGCTCTTCTCGAAGCCGTCGCCATGGCTGGGCTCGTTGGACTGTTGCGCCAGCTCGGCGACCTCGCTGAGTTTGCTGCTGAGATTTTCCATGATTTACATGAAGAAGTAATGGCTACTGCTTCAAGAGGCCACAGTCTTACAGCTCGTGTTAAACAGCTTGAGGCTGAAGTTCCTTCACTTGAAAAGGCCTTTTTCTCTCAAACTCACCATTCATCATTTTTTACTAATGGAGGGATTGATTGGCATTCCAATCTTCAGTCTGAACAAAACCTTGTTACTGGCGGAAACCTACCTAGATTGATAATGGATTCCTATGAAGAATGCCGCGGTCCCCCAAGACTGTTCCTTCTGGACAAGTTTGACGTGGCTGGGGCTGGGGCATGTCTGAAGCGGTATACTGATCCATCATTCTTTAAAATGGAGTCAACTTCTTCTGTAAGAGCAACTGTACAAGTACACAGGGAAAGAAGAATTCGTAAAGTCAAGCAGAAGAAAGGAGCACGGCTAAGAGACGGTGAAGCTCCTAATGCTGTACCAACACATTCAAAATTACATCAGCTGCTTCTCGAGGAACGTATTGAGAATGGTTATAGTAATCCAGCGCGCCTAGTGAAGTTGAAGAAAAGACAATTGAATGGACCTGCAGTTGAAGCGAAATCTGGGAAAAGTTACATGGAGAAATTTCTAGAAACTCCCTCGCCTGATCCGAAAATGATTTATGAAACTTCAATCTTTCCACTGCCTGTGACACCGGCACCAGACGATTCTAGCGAAACAGGGATTAAAATTCTTGAAATCAGTAGCATTAAAAAGTCAGTTGGAGATGAAAACTCTTGTTCACCCCCTTATGAGCAGGAATTTGAACTTAACCAGTTTCCTGAAGAGGTTGGTGAGGCAAATGGAGATCTTGTGATGGTGAAAGAACAAATCTCAGTGGGTGTAAGAGATGGAATGTCTTTTAATGATGTCAAGGTGTCTGATGAAACAGAACTGGCAATCATTGAACATAAGAAAATAGAAGGCATCTTAGAAAGGTACAACTCTGATGATGTGACCAGTGAGGTTGACAACTACATGGATGCTTTAACTACCATGGAGTCAGAATTGGAAACAGACGATGAGTATAAACCTAAGAAAAGCTTCTTGAATATTAAAAAGGCAACAGATATCAATAATAAAGAACGTCAACTACAAGCTCGATTGTCAGATTCTCAATCATTTGGAGGCTCTTCAACATCTGATGACATTAGCTCATTCAAACAAGAGACAAATGAGGAAGATATTGAAGTGAAAGCTCGGTTATCAGATTCTCACTCAACTGGAACCTCCTCGACATCAGACAATAATAGCTCATTCAGAGGAGATAAAGACGAGCATGTGGAACTGCAAGCTCACTTTTCAGATTCTCAATCAACTGGAAAATCCTCTACGTCAAATGTAAATAGTTCTTCCCTGAAAGATAAATCTCATTTCCTTCACTCTGATTCATTGAGCACAGTGGGTGAAAATATACAATCAGAACCTATTTTATTCTCAACTACTAAATATCATGAAGTAGAGATTGAAGGCATGCCATCCAACCAGCTTCCAGAAATTGTTGAGTTTCAAAATACAGATAATAGTAAGTTTGTCATGCGTGATGATACCCATGTTCATGAAGTAGGGGTTTCTGACTCTCGGCTAACGAATTCTGAGCCGTTGACTTCAGTAAAGATGTTGTGTTCTGATCTTGAACCTATCAAACCAGTGACGCTACCTGCAGTGACTCAGTCAGATGAAAGCGTTTCTGACAATGTTGAGCTTAATATAAAATTAGGCAATGGTGCAGACAGATCAGGTCTTGTTGAATCTGTTGCTTCCAAACCTTCTTCTCCCTCCCTTATAAAAGATGATACGTGCACTGTGTACTCTTCTGATAAAATTTCATCGGACAACTTGGTTGATGATTCCCTTTGTAATGATTCACAAGAAGGTTCCCTTTGTCCATCCATCAAAGAATTAGACTTGAATTTAGGTGATGAAATAAATGGATTCAGCAGCAGTGTTGATCCAATTGAAGGTGATGGTCATATTGAAAATCCTTCTTATAATCAAGTGATGGTAAATGGTGCGATCACTGAAATTGTTGAGTCAAAAGATCAACCCATTCCTTCTGTTGTTAGTGCTGAAAATGATGCGGGTATCATTACTTGTCCAGCTTCAAGTATGATTTGTTCTCCTTCAAGAAGCCTTCCGAATCCGCAAGAACTAGTCCACGCTTCTTCAGACTCTTATCCAATGGAATCTAATGAAGTGGAATTGACTCAAATTTCAACGGACTCAAATACAGATACGAGCGATAGTCAATTGGCACCACTGTCAGATCCAAATGAGAAAGAGACAGAAGACCATGAGGTAGTTGCTAGAGAATCTTTGACAGCACTAGAGGGACAGAAGGCTGCGGGTCACCCAGAACTTGTTTCTTCAGATGTACAGATGAACCTTAACAAATCGGTGCCTTGTGCTCTTCCAGATTTGGAAAATAATACTGAAAAGTCACCTACTAGGCGTGTTTTTCAGGATGATGCAAAAATGGTGCCTGGATTTTCTAGGTTTGAACCCCGGCAGTCAGAATCTACTAGTTATGGCCAGAACAATCTTATACAGAATGACAGAAATAGTTTTTCATCTACACCTGATGACAAGTTGGAGTCTGAAACTTATTTTGAGCCACACTTACAATCTCAACTTGATGAACAGGATGGAGAGTTTCCGCTCAAATATGAGGAAAACTTTGCCTCTGAGAAATCTCAATCTCAGCAGATGCATATAAATCAATTGAAGCAAGAAGACACTCATGCTACTTCTGAATCTGTCTCAGAAACCCCTGCGGATGAATCACCATCATATTATTCTTCACCACAGTCATCTGGCCTAGAAACTAACCATACACAATATGTCACAGATCCATTGAAGCCCGTTCTCCCTCACCTCTTTCCTAAGGAAACTGAAAACAAACTTAATGAGATGCCACCCATGCCTCCTCTTCCTCCTATGCAATGGAGAATGGGCAAGGTTCCATATGCTTCCGGAGATTCACATAGAGAGGAGTTAGAAGTGCATCCGGCTTCAGGTCAACGAATGCAGCCAGTTATGCCCGATACCAAGTCTCAATTTGGTTTTACATCTTCTGATGGAGATACCATATTTCATCAGAATCCATTTATGCCAATCATGGCTTTGGAAAGTGATAAGCTCCGACATTCTTCTGCCGTAGGTGTCTCAGGTCATCCAGTGGCTTTACCTTTTCAATTTCCTATTGTGGTTAATGAAGCAAATGGTCAGTATAATTACCTAGTGCTGGACAGAAACCAAATTCAGAACCCCTTATTAACTCTGCCCATGGTACCTACGACCATGCATCCGCCACTTGGTTACATTGTTGCTTCTGATGGAGAAATGGTACATACTTCAAATCCTTATGCACCAATACTACCTGCTGCATATACTGCAACTGGACATGATTCCACATCTCCACAAGTGGAACCATTTCAACATCCAACTCAAGTAATGACAGAGACTAGCGCAGAGGATAAAACACTTGAGCAGCCTATGCATAATGTAGTGTGTAGGGACGGGCCTTCAAACAGTCGTGTTATTGCTTCCGATGGAGAAATGGTACATAATTCAAACCCATTCCTTCCAGAACTTCCTGTCGAAGGTGCTAACTCAGGACATGATTCCATCTCTCCTATAGAAAAAGTGAGTGAATCTCCTAGTCAATTAATGGCAGAGACTAGTTCAGATGATACAACACCTCCGAAGCCTATGAGTGATGTTATACCTATGGACAGTCACATTGTCATTTCTGAAGAAAAAATGGTACAAAACTTTAACCCAGGCCCTCCTGTAATATCAGCCGATTCTGCTGTTTCTGAAGATGATTCCATCTCTCCGCACGAAAAACTAACTCAACCTCCAAGTCAGTTACTGAGGGAGACTAGTTTGGAAGTTAAAACACCTAATCATTCTATAAGGAATGTAGAAGGGGAACAGGAACGATTGGGTATTTCACTCACCTTGCCACCAAACATGGAAAGTGTAGAGCAAAATCAAAGTTTCCAGCCCTTTGAGGGGGAAATGTCGTCCTGGGGTTCATCTACTCAAACATCAGATTTTGAGAATGAAAGAACAAATGTAAAACCAAAGCATAAGATTCCTCGTCCTCGGAATCCTCTAATTGATGCTGTTGCTGCTCACGACAAAAGCAAGCTTAGGAGGGCTACTGAACGGGTTATGCCTCAAATAGCACCAAACGTAGATGAAAGAGATTCATGGTTAGAACAGATAAGAACAAAGTCCTTCAACTTGAAACCTGCTGTGGCTAAACGACCTAGCATTCAAGGTCCAAAAACAAATATGAAGCTTGCTGCCATCTTGGAGAAAGCTAATTCAATTCGCCAGGCTTTGGCTGGAAGTGATGAAGATGATGATGACGATAGTTGGAGCGATTCTTAA	4584	0.4167	MPLSKYLIRNEYSLADPELYRAADKDDPEALLEAVAMAGLVGLLRQLGDLAEFAAEIFHDLHEEVMATASRGHSLTARVKQLEAEVPSLEKAFFSQTHHSSFFTNGGIDWHSNLQSEQNLVTGGNLPRLIMDSYEECRGPPRLFLLDKFDVAGAGACLKRYTDPSFFKMESTSSVRATVQVHRERRIRKVKQKKGARLRDGEAPNAVPTHSKLHQLLLEERIENGYSNPARLVKLKKRQLNGPAVEAKSGKSYMEKFLETPSPDPKMIYETSIFPLPVTPAPDDSSETGIKILEISSIKKSVGDENSCSPPYEQEFELNQFPEEVGEANGDLVMVKEQISVGVRDGMSFNDVKVSDETELAIIEHKKIEGILERYNSDDVTSEVDNYMDALTTMESELETDDEYKPKKSFLNIKKATDINNKERQLQARLSDSQSFGGSSTSDDISSFKQETNEEDIEVKARLSDSHSTGTSSTSDNNSSFRGDKDEHVELQAHFSDSQSTGKSSTSNVNSSSLKDKSHFLHSDSLSTVGENIQSEPILFSTTKYHEVEIEGMPSNQLPEIVEFQNTDNSKFVMRDDTHVHEVGVSDSRLTNSEPLTSVKMLCSDLEPIKPVTLPAVTQSDESVSDNVELNIKLGNGADRSGLVESVASKPSSPSLIKDDTCTVYSSDKISSDNLVDDSLCNDSQEGSLCPSIKELDLNLGDEINGFSSSVDPIEGDGHIENPSYNQVMVNGAITEIVESKDQPIPSVVSAENDAGIITCPASSMICSPSRSLPNPQELVHASSDSYPMESNEVELTQISTDSNTDTSDSQLAPLSDPNEKETEDHEVVARESLTALEGQKAAGHPELVSSDVQMNLNKSVPCALPDLENNTEKSPTRRVFQDDAKMVPGFSRFEPRQSESTSYGQNNLIQNDRNSFSSTPDDKLESETYFEPHLQSQLDEQDGEFPLKYEENFASEKSQSQQMHINQLKQEDTHATSESVSETPADESPSYYSSPQSSGLETNHTQYVTDPLKPVLPHLFPKETENKLNEMPPMPPLPPMQWRMGKVPYASGDSHREELEVHPASGQRMQPVMPDTKSQFGFTSSDGDTIFHQNPFMPIMALESDKLRHSSAVGVSGHPVALPFQFPIVVNEANGQYNYLVLDRNQIQNPLLTLPMVPTTMHPPLGYIVASDGEMVHTSNPYAPILPAAYTATGHDSTSPQVEPFQHPTQVMTETSAEDKTLEQPMHNVVCRDGPSNSRVIASDGEMVHNSNPFLPELPVEGANSGHDSISPIEKVSESPSQLMAETSSDDTTPPKPMSDVIPMDSHIVISEEKMVQNFNPGPPVISADSAVSEDDSISPHEKLTQPPSQLLRETSLEVKTPNHSIRNVEGEQERLGISLTLPPNMESVEQNQSFQPFEGEMSSWGSSTQTSDFENERTNVKPKHKIPRPRNPLIDAVAAHDKSKLRRATERVMPQIAPNVDERDSWLEQIRTKSFNLKPAVAKRPSIQGPKTNMKLAAILEKANSIRQALAGSDEDDDDDSWSDS	1527

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi5g00414	1527	MobiDBLite	consensus disorder prediction	893	926	-	-
	Vivi5g00414	1527	MobiDBLite	consensus disorder prediction	769	827	-	-
	Vivi5g00414	1527	MobiDBLite	consensus disorder prediction	769	817	-	-
	Vivi5g00414	1527	MobiDBLite	consensus disorder prediction	1401	1417	-	-
	Vivi5g00414	1527	MobiDBLite	consensus disorder prediction	1401	1434	-	-
	Vivi5g00414	1527	MobiDBLite	consensus disorder prediction	425	447	-	-
	Vivi5g00414	1527	MobiDBLite	consensus disorder prediction	425	516	-	-
	Vivi5g00414	1527	PANTHER	WASP-1	1	1526	IPR028288	GO:0005856\|GO:0030036
	Vivi5g00414	1527	MobiDBLite	consensus disorder prediction	956	1004	-	-
	Vivi5g00414	1527	Gene3D	-	1412	1526	-	-
	Vivi5g00414	1527	Gene3D	-	104	216	-	-
	Vivi5g00414	1527	MobiDBLite	consensus disorder prediction	895	918	-	-
	Vivi5g00414	1527	MobiDBLite	consensus disorder prediction	1271	1296	-	-
	Vivi5g00414	1527	Gene3D	-	1	90	-	-
	Vivi5g00414	1527	MobiDBLite	consensus disorder prediction	494	516	-	-
	Vivi5g00414	1527	MobiDBLite	consensus disorder prediction	448	463	-	-
	Vivi5g00414	1527	MobiDBLite	consensus disorder prediction	464	479	-	-
	Vivi5g00414	1527	MobiDBLite	consensus disorder prediction	1262	1301	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vivi5g00414	Vivi-Chr5	6100463	6108263	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi5g00414	-		-	vvo:131601239	2935.59

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Vivi6g02322	6	102305458	102313097	Vivi5g00414	5	6100463	6108263	PCT