Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00409 ATGGCTTCCATGATTTCAACCTTGCCACCACCATTGCTACTTCATCATGGTAGAAAATCATTTTCTGGAAATTTCCAGAATTTCTCTGTTTCTCTTCTTGCAGGAAGACGGAATAGCGTTGCATTTGTTGTGAAGGCTTCTGGAGAAAGTTCTGAATCTTCAACTTCACTTACTGTTCTCAAATCTGTTCAGAATGTTTGGGATAAACCTGAGGACCGGTTGGGACTAATTGGTTTGGGCTTTTCAGCTGTAGTTGCATTTTGGGCATCGACAAATTTGATAGCAGCTATTGACAAATTGCCAATCATCCCGATTTCACTGGAACTAGTTGGAATACTTTTCTCAACGTGGTTCACTTATCGCTATCTCCTATTCAAGCCGGACCGGGAAGAACTTTTCAGAATCTTGAACAAGTCAGCTTCAGATATCTTGGGCCAGTAA 441 0.4127 MASMISTLPPPLLLHHGRKSFSGNFQNFSVSLLAGRRNSVAFVVKASGESSESSTSLTVLKSVQNVWDKPEDRLGLIGLGFSAVVAFWASTNLIAAIDKLPIIPISLELVGILFSTWFTYRYLLFKPDREELFRILNKSASDILGQ 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00409 146 Pfam CAAD domains of cyanobacterial aminoacyl-tRNA synthetase 62 145 IPR025564 -
Vivi5g00409 146 PANTHER - 33 146 IPR033344 GO:0009579
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00409 Vivi-Chr5 6009162 6011652 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00409 - - cam:101512436 236.498