Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00391 ATGGCATCCATCTCCGTTCTCCTCGTCGCCCAAGTTTTACCCTACCTCGAACAAGAACTCAACAAACGCTACAACCTTCTCCGCGTATGGGACTTCCCTCAAAAATCCAACCTCTTCGCTCAACACGCTGCGTCGATCCGCGCGGTGGTTGGACACTCCGGCGCCGGCGCCGATGCTGAACTCATCGACGCGCTTCCGAAGCTGGAAATCGTTTCGAGCTTCAGCGTTGGTGTTGATAAGATTGATCTTGGCAAGTGTAAGGAGAAAGGGATTCGTGTTACGAATACGCCTGATGTGTTGACTGATGAGGTTGCTGATTTGGCTATTGGTTTGATTCTTACGCTTTTGAGGAGGATTTGTGAGTGTGATCGGTTTGTTAGAAGTGGGAATTGGAAGCGTGGTGATTATAAATTGACTACTAAGTTCTCTGGAAAAAACGTTGGGATTATTGGGCTGGGAAGGATTGGCACCGCAATTGCCAAGAGAGCTGAAGGTTTTAATTGTCCAATAAGCTACTATTCCAGAACTCAAAAGCAAGATTCAAAATACAAGTACTATCCAAGTGTTGTTGAGCTAGCATCCAACAGCGACATACTGATCGTTGCCTGCCCTCTTACAGAGCAAACCCATCACATCATCAACCGAGAGGTCATCAATGCACTTGGTCCAAAGGGTTTCCTAATTAACATCGGCCGAGGTAAGCATGTTGATGAGCCAGAGCTGGTCTCTGCATTGGTTGAAGGTCGTTTGGGTGGAGCTGGACTCGATGTTTTTGAGAACGAGCCTCATGTTCCGGAAGAGCTGTTTGGGCTAGACAATGTTGTCCTGTTGCCTCATGTTGGAAGTGCCACAGTAGAAACTCGAACTGCCATGGCTGACCTTGTTCTTGGAAACCTGGAGGCTCATTTCCTTGGAAAGCCGCTGTTAACTCCATTGGTTTAA 942 0.4766 MASISVLLVAQVLPYLEQELNKRYNLLRVWDFPQKSNLFAQHAASIRAVVGHSGAGADAELIDALPKLEIVSSFSVGVDKIDLGKCKEKGIRVTNTPDVLTDEVADLAIGLILTLLRRICECDRFVRSGNWKRGDYKLTTKFSGKNVGIIGLGRIGTAIAKRAEGFNCPISYYSRTQKQDSKYKYYPSVVELASNSDILIVACPLTEQTHHIINREVINALGPKGFLINIGRGKHVDEPELVSALVEGRLGGAGLDVFENEPHVPEELFGLDNVVLLPHVGSATVETRTAMADLVLGNLEAHFLGKPLLTPLV 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00391 313 Gene3D - 17 307 - -
Vivi5g00391 313 Gene3D - 101 284 - -
Vivi5g00391 313 FunFam Putative 2-hydroxyacid dehydrogenase 101 284 - -
Vivi5g00391 313 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 101 282 IPR036291 -
Vivi5g00391 313 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 6 308 - -
Vivi5g00391 313 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 281 IPR006140 GO:0051287
Vivi5g00391 313 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 5 135 - -
Vivi5g00391 313 CDD HPPR 4 303 - -
Vivi5g00391 313 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 147 174 IPR029752 -
Vivi5g00391 313 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 8 310 IPR006139 GO:0016616|GO:0051287
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00391 Vivi-Chr5 5489283 5492211 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00391 - K18606 mtr:11418154 570.852