Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00350 ATGTTCTATGGTGCAGTGGTATGGGATCCTTGGCTTATTGTTGCTCAAATTGTTTGTCTTCAATGTATGTATTATATCACCCTTGGATTGCTGTTAACCGTTTTTGTTGGCACTCGTGTTTCTCGATTGAGCCTTGTGTATTTCTTTGACTATGTTACCGTTTCTACCTCTACCGTTACTGGTTGGTGTGTTGCTGCTTCGTTTCTGCTCAGCTCAGCTGCAGGGGCTGTGTATATGCTTTATTTGATTGAACGATCAAAGAAGTGCTTGGATTTTTCAGCCACTCTCTATATCATCCATCTTTTCATATGTATTGTGTATGGTGGCTGGCCCTCTTCTATTACATGGTGGATTGTGAATGGCACTGGAATTGCTGTAATGGCTTTGCTAGGTGAATATCTGTGTATGAAACGTGAACTCCAGGAGATAAAAATACCACGATATCGTTCAAATGTTTGA 459 0.4074 MFYGAVVWDPWLIVAQIVCLQCMYYITLGLLLTVFVGTRVSRLSLVYFFDYVTVSTSTVTGWCVAASFLLSSAAGAVYMLYLIERSKKCLDFSATLYIIHLFICIVYGGWPSSITWWIVNGTGIAVMALLGEYLCMKRELQEIKIPRYRSNV 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00350 152 PIRSF SYS1_homolog 1 152 IPR016973 GO:0000139
Vivi5g00350 152 PANTHER SYS1 1 150 IPR019185 -
Vivi5g00350 152 Pfam Integral membrane protein S linking to the trans Golgi network 5 144 IPR019185 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00350 K20318 - gmx:100817072 272.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g00350 5 4730083 4733760 Vivi5g00350 5 4730083 4733760 ECH