LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi5g00322	ATGAAATTACCATTTTCGGTTTCAGCATTTTGTTTGTGTTTTGTTTGTGTTTTGTTGGTGATTGTTCTTGCTGATTCACAACTTCCTGAGGAAATGTATAGATTTGATAATGATAAGAGATCTCATGTAAGCTATAAGTATGATAGAATTGATGAAGTTCAGAAACAATGTGTGTCTGTTTTAGCTTCCGCATCTGAATTGAGGTTGGGGTATAGTGGTGTTGTTGGGATGAAAAGGGAGTTTTCTTTTGTTAATGGGGATTGGGTTCAGGAGGATGGTAAGTTTCCAATTATGCCGTTTGATGATGGGGATTCTCCGGGGATGTTACCAGGAGATCGAAGTAGTCCGATGAAATTGGTGTCTTTTCGAGTAACGGATGTTGATCATGCTCATCGGTTGAAGAAGTCGATCCCGATTAATGGTTTTATGGCGATGGGAATTACTAGGGATGGTAGTTTTATGGAGAATGTGTATGGTGATGGGAATCTTGATTTTCGGTTATGGCCTGGACATTCTCAGCTTTCGATTCCTTTTCAAGGGGTTTATACGGAATCGAAGAGAAACGGTGGGGAGAGGGTGTTGTGTTTGTTAGGGAACACTAGGCTTCCGACTCGAGAAACTGATTCTGCTAATCCGTGGGAGTGGATGAAGAAGAATCCTAGTGATGTACCTATGTCGGAAGATGATCAAATCCTGCTGATTCTTCGCTATCCGTTGACGTTTACTTTAACAAATAGGATGATCACCGGAGAGTTGAGAAGTTTGAACCGTGATACGAATCCTAAATACTTTGACGTCGTTCACATATCGTCTCAGTTGGGTAGCTCGGCTAAGTTCACATTTGGCTCACAACATATTGTATCGAAAGCATGCGATCCATATCCGTATAAAGATAATCTGACGAGTAATGTCATTACTGTATACAAAGGGACAAGGTTCTGCGAAATCCTCGAAGAAGTTACTAGGGATAAACCTTTATCTGTTGTACCAAACTGGAGGTGTAACGGCACAGACGATTTCTGCAGTCGATTAGGTCCTTTTTTGTCGGATGAGAGAGTGAAATCAACACACGGAAGCTTTCAAGATGTTAAACTTTATATGCAGGATGTTATCTGTGAGCAAGCAGCTGGTAAACATAATTCTGGCTCCACTATGGTATCTGCAGTTTTTAGAGCGGTTTCTCCATCTGAGAATCGATATAATGCAGCAAAGAGATCCGGCGTCAACAACATGTCGCTTGCCACCGAAGGAATATGGAAATCTTCTAGTGGACAGCTTTGTATGGTCGGTTGCCTTGGACTTGTCGATGCCAAAGGGAGTAACTGTAATACTCGGATTTGTTTGTATATACCTACCACTTTCTCCATAAAGCAACGTAGTATTATTTCGGGAACTTTGTCTCCTATTAATAACAACAGTGACTTTTTTCCTCTATCATTTGAACAGCTTGTGCAACCTACAGAACTCTGGAATTATTTCATGTTCACTCATCCAAATTACAGTTACTCCAAAACTAATCTTGCCGGCACGATCCTAGAAAAAAACGAGCCCTTCAGTTTTTCAACCGTCGTCAAGAAATCATTGCTAACTTTCCCTAAACTTGAAGACGAGACATTCCAAGATAGTCTGTCTCTTCTTTCGGAAGATCTCACTTTTCATGTCCCAGGTTTTCCCGATCCTATGCCTCGTGTGCAGGCCCCAAGAGTTGATATTCAGATGGAGATTATCTCTGTTGGTCCAATGTTTGGGCGTTATTTTGACGCCCAAAATGGTTCAACAGTGGAACAACTAGACACACCGAATCAAGCAAGCACCGCTGAATATACCGAAAAACAGCTTCTTTTAAATGTATCTGCACAACTGAGTCTTAGTGGAAAAGGTTATAGTAATTTTTCCATGCTTTTTCTGGAAGGTCTTTATGATCCACATGTTGGAAAGATGTATCTTATTGGTTGCAGAGATGTGCGAGCATCATGGAGCGTCTTATATCAGAGCTATGATCTAGAGGCTGGAATGGACTGTTTAATTGAGGTGGTTGTTTCGTATCCTCCGACAACAACTCGGTGGCTAGTCAATCCCACTGCCACAATTTCTATAGAAAGTCAAAGGACAGACGATGATGGTCTTCGGTTCAACACGATAAAGCTCCAAACTTTTCCGATCATATACAGAAAGCAACGCGAGGATGTCCTCTCACACCGAGGCGTCGAAGGGATTCTCCGGATCTTGACACTAACTTTTGCAGTTGGTTGCATTTTTAGCCAACTGTTTTACATAAAGCACAATATGGATTCTCTTCCATATACATCTCTTGTTGTGCTTGGTGTTCAATCTCTTGGTTATAGCATTCCTCTAATCACAGATGCAGAAGCTCTTTTCAAGAGAATGGTTTCGGAGTCTTATGATGTGTCGTCATCCGGTACTTTGGAGAACAGTGAGTGGCTCCATATCATCGATTACACTGTGAAACTTTTGTTGATTGTATCGTTGCTACTAACCCTGCGGCTTTTTCAGAAAGTCTGGAAGTCTCGAATCAGATTGCAAAAGCGAACCTCTTCTGATCCCCTTTCTGTCCCAAGTGATAAAAGGGTACTTCTTTGTACCTTCGCCATACATCTTATCGGTTACATACTTGTTATGATAATTCACAGCACGAAAACCAGTCCGAAACATCTTAGAGAAAAGGCATATATGGTTGATAAAGAAAATTCTCATTCGTTGCCAGATTGGGCGGCGGAATTGGAAGAATATGCAGGTCTTGTGCAAGACTTTTTCTTGTTTCCACAAATCCTTGGGAACTTAATCTGGCAAATCAATTGTAAACCACTCAGGAAACTATATTTTATCGGAATCACTCTAGTAAGACTTCTTCCTCATGTATACGACTACATTCGAGCTCCGGTTCCAAATCCTTACTTTACCGAGGACTCAGAATTTATCAATCCAAGTTTGGATTTTTACTCGAAATTCGGTGACATTGCTATTCCCGTGACTGCGATTATTCTTGCAATTTTGGTCTATATTCAACAAAGATTGGGCTATGGCAAGTTGAGTGAGGTTCTGACATTTGGGCGATATAAGCTTCTTCCAAGTTTCAGATATGAAAGGTTGGATTCTAAGTCCTCTGAAACAGAACTAGTTTCAGGCATCAATGGTAGTGGTGAAAATGAGAAAGAACATGGTGATGTAGAATGA	3195	0.4097	MKLPFSVSAFCLCFVCVLLVIVLADSQLPEEMYRFDNDKRSHVSYKYDRIDEVQKQCVSVLASASELRLGYSGVVGMKREFSFVNGDWVQEDGKFPIMPFDDGDSPGMLPGDRSSPMKLVSFRVTDVDHAHRLKKSIPINGFMAMGITRDGSFMENVYGDGNLDFRLWPGHSQLSIPFQGVYTESKRNGGERVLCLLGNTRLPTRETDSANPWEWMKKNPSDVPMSEDDQILLILRYPLTFTLTNRMITGELRSLNRDTNPKYFDVVHISSQLGSSAKFTFGSQHIVSKACDPYPYKDNLTSNVITVYKGTRFCEILEEVTRDKPLSVVPNWRCNGTDDFCSRLGPFLSDERVKSTHGSFQDVKLYMQDVICEQAAGKHNSGSTMVSAVFRAVSPSENRYNAAKRSGVNNMSLATEGIWKSSSGQLCMVGCLGLVDAKGSNCNTRICLYIPTTFSIKQRSIISGTLSPINNNSDFFPLSFEQLVQPTELWNYFMFTHPNYSYSKTNLAGTILEKNEPFSFSTVVKKSLLTFPKLEDETFQDSLSLLSEDLTFHVPGFPDPMPRVQAPRVDIQMEIISVGPMFGRYFDAQNGSTVEQLDTPNQASTAEYTEKQLLLNVSAQLSLSGKGYSNFSMLFLEGLYDPHVGKMYLIGCRDVRASWSVLYQSYDLEAGMDCLIEVVVSYPPTTTRWLVNPTATISIESQRTDDDGLRFNTIKLQTFPIIYRKQREDVLSHRGVEGILRILTLTFAVGCIFSQLFYIKHNMDSLPYTSLVVLGVQSLGYSIPLITDAEALFKRMVSESYDVSSSGTLENSEWLHIIDYTVKLLLIVSLLLTLRLFQKVWKSRIRLQKRTSSDPLSVPSDKRVLLCTFAIHLIGYILVMIIHSTKTSPKHLREKAYMVDKENSHSLPDWAAELEEYAGLVQDFFLFPQILGNLIWQINCKPLRKLYFIGITLVRLLPHVYDYIRAPVPNPYFTEDSEFINPSLDFYSKFGDIAIPVTAIILAILVYIQQRLGYGKLSEVLTFGRYKLLPSFRYERLDSKSSETELVSGINGSGENEKEHGDVE	1064

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi5g00322	1064	Pfam	Protein of unknown function (DUF2921)	54	1017	IPR021319	-
	Vivi5g00322	1064	ProSitePatterns	EF-hand calcium-binding domain.	802	814	IPR018247	-
	Vivi5g00322	1064	MobiDBLite	consensus disorder prediction	1044	1064	-	-
	Vivi5g00322	1064	PANTHER	FAMILY PROTEIN, PUTATIVE (DUF2921)-RELATED	14	1027	IPR021319	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vivi5g00322	Vivi-Chr5	4180164	4183845	Dispersed/Transposed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi5g00322	-		-	tpra:123921585	1858.96