Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00307 ATGAACTATGCATGTTATCATATGGGGTCTGGTAGTAGAACTGAGAGAAGGCCTTTGGAGTTTGGTAAGACTCATGTAGTGAGGCCTAAAGGAAAACATCAAGCAACTATAGTTTGGCTGCATGGTCTTGGTGACAATGGTTTGAGCTTATATCAGCTTCTCGAATCACTTCCACTTCCAAATGTAAAATGGATTTGTCCAACTGCACCTACGCGTTCTGTAGCTATACTTGGTGCTTTTTCTTGCACTGCATGGTTTGATATGGGAGAACTTTCAGAAGATGGTCCAGTTGATTGGGAGGGTTTAGATGCCTCAGCAGCACATATTGCTAATCTGTTGTCAGCTGAGCCACCTAATGTGAAAATTGGGATTGGAGGGTTCAGTATGGGTGCTGCAACAGCTCTCTATTCTGCAACATGTTTTGCCATGGGAAAGTATGGAAATGGAATTCCTTATCCTATCAACTTAAGAGCAGTTGTTGGACTAAGTGGCTGGCTTCCGGGATCAAGGACCTTAAGGAGCAAGATAGAGGTGTCACATGAGGCAAAAAGGAGAGCTGCTTCATTACCAATTTTCATGTGCCATGGAATTAGTGATGATGAAGTTCCCTACAAATTTGGAGAGAAATCAGCTCAATCCTTGAGTTCAGCAGGGTTTCAATATACAACCTTCAAATCCTATGATGGGATTGGTCATTATACAGTTCCTAGAGAGATGACTGATGTTTCCAATTGGCTTGGCTCAAGGTTAGGGCTTGAGGGACCCTTATAA 771 0.428 MNYACYHMGSGSRTERRPLEFGKTHVVRPKGKHQATIVWLHGLGDNGLSLYQLLESLPLPNVKWICPTAPTRSVAILGAFSCTAWFDMGELSEDGPVDWEGLDASAAHIANLLSAEPPNVKIGIGGFSMGAATALYSATCFAMGKYGNGIPYPINLRAVVGLSGWLPGSRTLRSKIEVSHEAKRRAASLPIFMCHGISDDEVPYKFGEKSAQSLSSAGFQYTTFKSYDGIGHYTVPREMTDVSNWLGSRLGLEGPL 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00307 256 Gene3D alpha/beta hydrolase 17 251 IPR029058 -
Vivi5g00307 256 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 254 - -
Vivi5g00307 256 Pfam Phospholipase/Carboxylesterase 24 246 IPR003140 GO:0016787
Vivi5g00307 256 SUPERFAMILY alpha/beta-Hydrolases 25 250 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00307 Vivi-Chr5 3960458 3963334 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g00307 3 254 Acyl Lipid Metabolism Gene Families AT3G15650 72.222 2.83e-124 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00307 K06130 - gmx:100782153 454.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g00307 5 3960458 3963334 Vivi5g00307 5 3960458 3963334 ECH