Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00296 ATGTCGTTTTTCTCCGCAACTGCAACCGTTCCTCAAAACCTCACCTTCGCTTCCTCTAACAAACTCTCATTTTCTCTCTCATCATCTTCTTCTTCTACGTCGTCGTTTAACTCTCTCTCATTTCCCTCATTTCAATTCAACTTCTGCAAAAGCATAACTACCTCACCCCAAATCACACGCGCTCACGCGCCTCCTACTCCTGCAACCACAACCACCGCCGCCTCATCCTTCCATGGCATCTGTTACGTCGTCGGCGACAACATCGACACCGATCAGATCATTCCCGCCGAACATCTCACTCTCGTCCCTTCCAAGCGCGACGAGTACGAGAAGCTAGGTTCCTTCGCCCTAATCGGACTTCCCGATTCGTATTCCGTCCGATTCGTTGAACCCGGGGAGATTAAAACCAAATACTCAATCATAATCGGCGGTGCTAATTTTGGCTGTGGATCCTCCCGTGAACACGCGCCGGTTGCGTTAGGTGCTTCTGGTGTCGCTGCTGTTGTGGCGGAATCCTATGCAAGGATCTTTTTCAGAAACTCGGTGGCTACTGGTGAGGTGTATCCGTTGGAGTCAGAGACGAGGTTGTGTGAGGAGTGTCATACGGGAGATGTGGTCACGGTTGAGCTCGAGGAGAGTCGTTTGATCAATCATACGACTGGGAAGGAGTATCAGTTGAAGCCGATTGGAGATGCTGGTCCGGTCATTGAGGCTGGTGGCATCTTTGCTTATGCTAGGAAAACCGGCATGATTCCTACTCGATAA 765 0.5059 MSFFSATATVPQNLTFASSNKLSFSLSSSSSSTSSFNSLSFPSFQFNFCKSITTSPQITRAHAPPTPATTTTAASSFHGICYVVGDNIDTDQIIPAEHLTLVPSKRDEYEKLGSFALIGLPDSYSVRFVEPGEIKTKYSIIIGGANFGCGSSREHAPVALGASGVAAVVAESYARIFFRNSVATGEVYPLESETRLCEECHTGDVVTVELEESRLINHTTGKEYQLKPIGDAGPVIEAGGIFAYARKTGMIPTR 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00296 254 FunFam Isopropylmalate/citramalate isomerase small subunit 73 250 - -
Vivi5g00296 254 Pfam Aconitase C-terminal domain 140 185 IPR000573 -
Vivi5g00296 254 Gene3D Aconitase, domain 4 74 250 IPR015928 -
Vivi5g00296 254 PANTHER 3-ISOPROPYLMALATE DEHYDRATASE SMALL SUBUNIT 2-RELATED-RELATED 73 252 - -
Vivi5g00296 254 CDD IPMI_Swivel 83 210 IPR033940 -
Vivi5g00296 254 SUPERFAMILY LeuD/IlvD-like 77 251 - -
Vivi5g00296 254 NCBIfam 3-isopropylmalate dehydratase, small subunit 81 247 IPR011827 GO:0016836
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00296 K01704 - gmx:100809737 329.331