Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00279 ATGCGAAGAGATTTCTGTGACGGCGTAGGAATTGCTCGGCTGTTAAATGCAACGCTTGTCCTGCCAAAGTTTGAAGTGGCTTCATATTGGAATGAAACAAGTGGTTTCGCGGATGTATACGATCTAGACTACTTCATTCAACAGATGGATGGCTTTGTCAAAGTCGTCAAAACGTTGCCACCGGAGATTGCAACAAAAGAACCTGTTCAAGTGGACTGTAGCAAAAGGAAAGGCCAATTCGATTACGTCGAAAGCGTTCTCCCATCTTTATTAAAACACAAATACATTTCAATCACACCAGCAATGTCCCAAAGAAGGGACAGATATCCTTTGTATGCAAAAGCTGCATTGTGTCAAGCTTGTTACAAGGCGTTACATCTCGCCAAACCCTTGGAAATGAAAGCCTCTAAGCTCCTAGACGCAATACCTAAACCCTTTCTGTCACTCCATCTTCGTTTTGAGCCCGACATGGTTGCGTATAGCCAGTGCCAATACCCTGGTCTCTCGCCTTCTTCCATCAAAGCCGTAGAAGCAGCAGTAGCATTGGTCGAGCGAAAACCATGGACCGGAGAAGTAGCCCGTGTATGGAGACAACGCGGGAAATGTCCTCTCACACCTAATGAGACAGCTTTAATACTTCAATCTCTTTCTATTCCTTCAACAACGAATATATACCTGGCAGCCGGTGACGGTCTAATGGAGATCGAAGGGTTAACCAATATTTACACAAACACATTCACCAAGTCTAGCCTTCTCAATGAAGAAGACTTCACAAACATGCATGGCAATACAAAAGCTGCTTTGGATTATCACATATCTATCAATAGTGATTCATATATAGCTACATATTTTGGGAACATGGACAAGATGGTCGCAGCCATGAGAGCTTTCAAAGGGTTATACAAAACACTGTTTTTGAGTAGAAGAGGATTCGCCGAATTAACCTCACAAGGTCTGAGGGAAAAAGAGCTGATGCAAGCCCTATGGAAGGTTCACAGGGACGAGTTTGTCGCGGGAAGAGGCTCTGCACTTCCCGAGTGTTTTTGCGAATTCAAGTTGTGA 1062 0.4407 MRRDFCDGVGIARLLNATLVLPKFEVASYWNETSGFADVYDLDYFIQQMDGFVKVVKTLPPEIATKEPVQVDCSKRKGQFDYVESVLPSLLKHKYISITPAMSQRRDRYPLYAKAALCQACYKALHLAKPLEMKASKLLDAIPKPFLSLHLRFEPDMVAYSQCQYPGLSPSSIKAVEAAVALVERKPWTGEVARVWRQRGKCPLTPNETALILQSLSIPSTTNIYLAAGDGLMEIEGLTNIYTNTFTKSSLLNEEDFTNMHGNTKAALDYHISINSDSYIATYFGNMDKMVAAMRAFKGLYKTLFLSRRGFAELTSQGLREKELMQALWKVHRDEFVAGRGSALPECFCEFKL 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00279 353 PIRSF UCP009360 1 352 IPR024709 -
Vivi5g00279 353 CDD O-FucT_plant 1 303 IPR024709 -
Vivi5g00279 353 PANTHER OS02G0726500 PROTEIN-RELATED 1 342 - -
Vivi5g00279 353 Pfam GDP-fucose protein O-fucosyltransferase 1 297 IPR019378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00279 Vivi-Chr5 3605795 3608683 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g00279 1 314 Miscellaneous Gene Families AT5G01100 33.642 3.77e-50 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00279 - - lja:Lj3g3v2211450.1 646.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g00279 5 3605795 3608683 Vivi5g00279 5 3605795 3608683 ECH