Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00261 ATGGCTTTGGCACGTTTGGTTATGAAAAATTTAGAGCAAAGGGCATTATCATCTGGAGGAGGTTCCTTGCAGAAGCAATATCAATACAAGAGGTTGAGTGATAAAATTAATAATAATGAAAAGTTGGTTGCAAGGTTTTCAAGTGGTGTTGGTGATAAGGTGAAATCTGAAGGAAGTAGTGAAGTGGCTGTCTCAGAAGGTAATAATAATAGTAAGAAGTCAAGGTTGCTACCAAAGAGGAGAGGTAGAAGATGGCTTTCTAGAAACCTTGATCGTGACTTCTCTCCTACTCCTTTTGGGTTATTTCCACCAAGTCTTGGAAATGCACTAATGCAAGCGACTGAAAACATGAACAAACTATTTGAAAACATGAATTTGACACCATGGTCGTTAACCGGACGAGTCAGAGAAAGTGACAACCATTACAAACTAAAGTATGACATGCCAGGAATTCCTAAAGAGAATGTGAACATCACAATTGGTGATGGAGTTTTAACAATAAAAGGAGAACACAAAGAAGAAAAAGGTGATGATGATGATGATGATGATAATAATGAGTATTGGTCATCTTATGGTTATTATAATACTAGTATGGTTTTGCCTGATGATGCTAAGGTTGATGAAATTAAGGCTGAGTTGAAAGATGGTGTTTTGGTTGTTACCATTCCTAGGAGTGAGAAGGTTAAGGAAGATGTTAAGCATGTGAATGTAGAATGA 717 0.3696 MALARLVMKNLEQRALSSGGGSLQKQYQYKRLSDKINNNEKLVARFSSGVGDKVKSEGSSEVAVSEGNNNSKKSRLLPKRRGRRWLSRNLDRDFSPTPFGLFPPSLGNALMQATENMNKLFENMNLTPWSLTGRVRESDNHYKLKYDMPGIPKENVNITIGDGVLTIKGEHKEEKGDDDDDDDNNEYWSSYGYYNTSMVLPDDAKVDEIKAELKDGVLVVTIPRSEKVKEDVKHVNVE 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00261 238 SUPERFAMILY HSP20-like chaperones 122 237 IPR008978 -
Vivi5g00261 238 MobiDBLite consensus disorder prediction 49 80 - -
Vivi5g00261 238 Gene3D - 103 238 IPR008978 -
Vivi5g00261 238 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 120 238 IPR002068 -
Vivi5g00261 238 PANTHER 26.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 55 237 IPR044587 GO:0009408
Vivi5g00261 238 Pfam Hsp20/alpha crystallin family 135 237 IPR002068 -
Vivi5g00261 238 CDD ACD_sHsps-like 135 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00261 Vivi-Chr5 3290122 3292135 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00261 K13993 - gmx:100787482 227.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g00261 5 3290122 3292135 Vivi5g00261 5 3290122 3292135 ECH