Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00260 ATGGCTCTACCTGCTACATCCTATCATCTACATGGACTCAAACTTGCAACAATATTCACTGTGCTTTTCATCTTTTTCTTCTCCATATCAGGTGGATCAGTGATATTGGAGAAAAATGAGACTTTGGAAGGAAGGAAAATGGTGATAGGATCAAGGCCTCCTTCTTGTTTAAACAAGTGCATGAATTGTAGGCCTTGTACAGCAACTTTGGTTATTCCAAATAATAAAAAAAGAAATAAGGGTTTCCAAGTGTTATCTCGTGGTGATCAAGATGAAACCTATTACCTTCTAACATGGAGATGTATTTGTAGAAATAAGCTATATCAACCCTAA 333 0.3634 MALPATSYHLHGLKLATIFTVLFIFFFSISGGSVILEKNETLEGRKMVIGSRPPSCLNKCMNCRPCTATLVIPNNKKRNKGFQVLSRGDQDETYYLLTWRCICRNKLYQP 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00260 110 PANTHER EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 4 41 110 IPR039455 GO:0010374
Vivi5g00260 110 Pfam Epidermal patterning factor proteins 48 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00260 Vivi-Chr5 3284278 3285750 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00260 - - gmx:102659819 137.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g07704 2 224607589 224607996 Vivi5g00260 5 3284278 3285750 PCT