Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00256 ATGGAGAACGAATCGCGAAGTGGTGCCAAAGATCAAGTCCCGTCGGTTCAGCTTTCAGCTCCTCCTTCTTGGAAGAAACTGTACTTCCCTAAGAAAGCAGGAACACCAAGAAAAGGCGAGATTGTATTCGTTGCTCCAACTGGAGAAGAGATAACCTCCAGAAGACAATTGGAGCGGTACCTAAAATCTCATCCTGAGAATCCCAACATATCAGAGTTTGATTGGGGAACCAGTGACACACCAAGGCGATCATCAAGGATTAGTGAGAAGGTCAAAACAACTCCAGAAGCCGAGCCTCCGAAGAAACGTGGTCGAAAATCAATTGGTTCAAAGAAGGACGACAAGGTAACCGAAACTGAAGCTCATTCCGAGGAAGCCACCGAGCCTCCAAAGAAACGTGGTAGGAAATCAATTGGTTCAAAGAAGGATGACAAGGTAACCGAAACTGAAGCTCATTCAGAGGAAGCGGAGCCTCCGAAGAAACGCGGTCGAAAACCATCTGCTTCCAAGAAACATGAAAAAGAGACCGAAACTGAATTTCCTCCAGAGGAAGCCGAGCCTCCGAAGAAACGCGGTCGAAAACCATCTGCTTCAAAGAAACATGACAAAGAGACCGAAACTGAATCTCCTACAGAGGAAGCCAAGGAAAAGGAAAAGTTTTCTGCAGAAGAACCGAAAGCCGATCTAGTTGATGCTGATAAGAACATTGATGATAAAATAAAGAGAGATGATGCAGAGGTAATTAAGCAAAGTAATGCAGAAGGTGAACTTGTTCAAGAAGCTTCGAATGCTGTTGTGGAGGAATCGGCAAGGGAAAAGTCTTCTGTGGAAGAACCGAAGGCTGATCCAATGGACACTGATGACAATGTCAATGATAAAACAAGGAGTGACGACACAGAGGAAATTAAGCAAAGTAATGCAGAAGGTGAACATGTTATTGAAGCTTCGAATGCTGTGGTTGAAGAAGCAATAGCTGAATCGGCAAAGGAGAAGTCTTTTGCGGAAGAACCGAATGCCGATCCAATGGACACTGATAACAACGTCAATGATAAAACAAGGAGTGATGATGCAGAGGAAGTTAAGCAAAGTAATGCAGAGGGTGAACTAGTTCAAGAAGCTTCGAATGCTGTGGCTGAGGAGGCAATAGTTGAATCGGAAAAGGAAAAGCCTTCTGCAGAAAAACCGGATGCTGATCCAATGGATGCAGATAGCAACATCGATGATATAACAAAGAGTAGTAATGCAGAGGAAATTAAGCAAAGTAGTACAGAAGGTGAACTTGGTCAAGAAGCTTTAAATGCCGTGGTCGAGGAGGCAATAGTTGAAACAGAGAAGGAACTGTTTTCTGCAGAAGAACCAAAAGCCGATCCAATTGATGCTGATAACATAGTCATTGATAATACAAAGAGTGATGATGTAGAGGAAATTAAGGAAAGTAATGTGGAAGCTGAAAATTTGACTGCTGCGAACCCTCAAGTGGAAGAAATCCCAATTGCAGAACCAGAGGAACAACTTGTTGAAGAAGCTTTTAATGCCGTGGTTGCTGAAAAACTGCAAGGGGAGGCACCAGAGGAACAACTTGTTGAAGAAGCTTTGAATGTTGTGGTTGCTGAAAACCCGCAAGAGGAAGCACCAGTTGAAGTGACAAAAGAAAATGGTACAATCGACAGTAGTAAGCAGGAAAAATTAGGTGCTGAGGTAAACGAAGGAGCTGAAAAAGTGACTCTCAACGTCGAAGAAATTAATGGCAAGAATGAAATCCCAGCAAGTGATGAGAAACAAACAATTCAAGGTGAGGAGCAAGTGAAGAAGATGGTTGACAATGAGAGTGTTATTTGGAACTTTGCTCAATGA 1854 0.4315 MENESRSGAKDQVPSVQLSAPPSWKKLYFPKKAGTPRKGEIVFVAPTGEEITSRRQLERYLKSHPENPNISEFDWGTSDTPRRSSRISEKVKTTPEAEPPKKRGRKSIGSKKDDKVTETEAHSEEATEPPKKRGRKSIGSKKDDKVTETEAHSEEAEPPKKRGRKPSASKKHEKETETEFPPEEAEPPKKRGRKPSASKKHDKETETESPTEEAKEKEKFSAEEPKADLVDADKNIDDKIKRDDAEVIKQSNAEGELVQEASNAVVEESAREKSSVEEPKADPMDTDDNVNDKTRSDDTEEIKQSNAEGEHVIEASNAVVEEAIAESAKEKSFAEEPNADPMDTDNNVNDKTRSDDAEEVKQSNAEGELVQEASNAVAEEAIVESEKEKPSAEKPDADPMDADSNIDDITKSSNAEEIKQSSTEGELGQEALNAVVEEAIVETEKELFSAEEPKADPIDADNIVIDNTKSDDVEEIKESNVEAENLTAANPQVEEIPIAEPEEQLVEEAFNAVVAEKLQGEAPEEQLVEEALNVVVAENPQEEAPVEVTKENGTIDSSKQEKLGAEVNEGAEKVTLNVEEINGKNEIPASDEKQTIQGEEQVKKMVDNESVIWNFAQ 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00256 617 MobiDBLite consensus disorder prediction 250 431 - -
Vivi5g00256 617 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 10 80 IPR001739 GO:0003677
Vivi5g00256 617 MobiDBLite consensus disorder prediction 324 338 - -
Vivi5g00256 617 PANTHER METHYL-CPG BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 7 127 IPR039622 -
Vivi5g00256 617 SUPERFAMILY DNA-binding domain 14 101 IPR016177 GO:0003677
Vivi5g00256 617 MobiDBLite consensus disorder prediction 554 568 - -
Vivi5g00256 617 MobiDBLite consensus disorder prediction 266 308 - -
Vivi5g00256 617 MobiDBLite consensus disorder prediction 83 237 - -
Vivi5g00256 617 Pfam Methyl-CpG binding domain 16 77 IPR001739 GO:0003677
Vivi5g00256 617 MobiDBLite consensus disorder prediction 1 237 - -
Vivi5g00256 617 Gene3D - 1 111 - -
Vivi5g00256 617 MobiDBLite consensus disorder prediction 381 414 - -
Vivi5g00256 617 MobiDBLite consensus disorder prediction 346 365 - -
Vivi5g00256 617 MobiDBLite consensus disorder prediction 545 571 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00256 Vivi-Chr5 3243497 3247123 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00256 - - psat:127106715 709.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g00256 5 3243497 3247123 Vivi5g00256 5 3243497 3247123 ECH