Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00251 ATGAGTAATGAAGAGTTGGTTATTCAAGCTGAGTATGTGTACAAAGAAGAGACTCGACTCACTGTTTTGAAAACATCTCGGTTCTTCACTGGTGATGGCTTTGTTGTGTATGATTGTAAGGGACAACTCGTTTTCCGATTCGACTCGTATGGACCTAACACTCGTGATAAGGAAGAACTTGTTCTCATGAATCCTCATGGTCGTTCTCTTCTCACCTTACGGAAAAAGAAACCTAGTCTTCATCAACGATGGGAAGGGTTTAAAGGAGAGAGAAAGGACGGTGATAAACCTATTTTTAATGTAAAAAGATCATCAATAATTGGGCGATCTCGAACAACCATAACGGTGGAAGTACATGAGAATCCAGGTATGGAGTACTTCATTGAAGGGTGCTTCCCACAACGATGCTGTAAGATTTTCAATGCTACAAAAAAATTAGTGGCTGAGATTCGCCGCAAAGTAGACCCCACCACTAATGTTATGCTTGGAAAAGAAGTGTTCTTGCTTTGCGTTCAACCTGATTTTGATGTGTCCTTTGCCATGGGATTGGTTTTGGTATTGGATCAAATCAATGGTGAGAATTTCTTTGATAATGGGACCATCGAGACCTCGGTGCACCCTACTATAGAAGATTGA 636 0.4088 MSNEELVIQAEYVYKEETRLTVLKTSRFFTGDGFVVYDCKGQLVFRFDSYGPNTRDKEELVLMNPHGRSLLTLRKKKPSLHQRWEGFKGERKDGDKPIFNVKRSSIIGRSRTTITVEVHENPGMEYFIEGCFPQRCCKIFNATKKLVAEIRRKVDPTTNVMLGKEVFLLCVQPDFDVSFAMGLVLVLDQINGENFFDNGTIETSVHPTIED 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00251 211 Pfam LURP-one-related 7 186 IPR007612 -
Vivi5g00251 211 Gene3D - 5 194 IPR038595 -
Vivi5g00251 211 PANTHER - 18 191 IPR007612 -
Vivi5g00251 211 SUPERFAMILY Tubby C-terminal domain-like 6 191 IPR025659 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00251 Vivi-Chr5 3154910 3157623 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00251 - - gmx:100789078 349.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g00251 5 3154910 3157623 Vivi5g00251 5 3154910 3157623 ECH
Vivi2g07710 2 224755284 224757325 Vivi5g00251 5 3154910 3157623 PCT