Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00249 ATGAACCGTCTCCTCTCCTTCCTCTTCCATCAGGGAGTATTGGATGAGCAATTCTTGCAGCTTCAGCAACTACAAGATGAGACATCACCAAACTTTGTCTCTGAGGTTGTCAACATTTATTTTCACCAGTCTGAGAAGCTTCTTAGGAATCTCAGATCATTGCTGATGGAGAGAGAGTTCATGGATTATAAGAAAATAGGGATTGATTTGAATCAGTTTATGGGTAGCAGTTCAAGCATTGGTGCAAAAAGAGTGACTAATGTTTGCGTCGCCTTTCGTGTCGCCACCGAACAAAACAACCGTGCCGGATGTTTTAGAGCATTGGAAATGCTGGAACATGAATATTGCTATCTCAAGAACAAATTGCACGAACTATTCCAAATTGAACAGCAACGTGCATTGGCAGCTGGAGTGAGGAATCCAGTACAGAATGAATAA 438 0.4178 MNRLLSFLFHQGVLDEQFLQLQQLQDETSPNFVSEVVNIYFHQSEKLLRNLRSLLMEREFMDYKKIGIDLNQFMGSSSSIGAKRVTNVCVAFRVATEQNNRAGCFRALEMLEHEYCYLKNKLHELFQIEQQRALAAGVRNPVQNE 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00249 145 FunFam Histidine-containing phosphotransfer protein 1 1 141 - -
Vivi5g00249 145 PANTHER PHOSPHORELAY INTERMEDIATE PROTEIN YPD1 1 131 IPR045871 GO:0000160|GO:0009927|GO:0043424
Vivi5g00249 145 Gene3D HPT domain 1 144 IPR036641 GO:0000160
Vivi5g00249 145 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 5 131 IPR036641 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00249 Vivi-Chr5 2980220 2982134 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00249 K14490 - gmx:100789608 256.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g00249 5 2980220 2982134 Vivi5g00249 5 2980220 2982134 ECH
Vivi2g07711 2 224800477 224801330 Vivi5g00249 5 2980220 2982134 PCT