Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00228 ATGGTGTTTTCTGCTATGTTTTCTCCTACTCTCAACCTTGCAATTTCTTCAACTACCAAGTGTTGTAGCAGAAGAAGAGAATCAAGAAGAGGGTTGAATAGTATGAGAGTAAGAGCTAGCTCCACAGATAAAGATGAAGATGAGAAATCTTCGTTCAATCCTTTTGGATTTGTTACTGATAATGCATCAAGCCGTAGTGCCATTCAATTGCCTGAAACTCCTGCTGAAGCTGGCAACGTTGGACAAATGATTGATAAAATACAAGACAAGGGCAAGGAATTCGGGTCATATGTGAAATCCGGGAAGTTGAGATGGTTTGTGAGGGAAACTGGATCAGTAAAAAGCAGACGAGGAACAATTGTTTTCCTTCACGGTGCCCCGACTCAATCTTTTAGCTACCGAGTCGTTATGTCTCAGTTGGCAGATGCAGGGTTCCATTGCTTTGCACCCGACTGGATAGGATTTGGTTTCAGCGATAAACCGCAACCAGGATATGGTTTTAATTACACAGAAAAGGAGTTCCATGATGCATTGGATAAAATTCTTGAAGTGTTGAAAATCGAATCTCCGTTTTTCCTAGTTGTTCAGGGATTTCTCGTAGGTTCATATGGACTAACATGGGCCTTGAAGAACTCGAGCAAGATATCAAAGCTAGCAATACTAAACACTCCATTAACCGCTTCATCTCCCATTCCTGGATTATTTCAGCAGCTAAGATTTCCTCTATATGGTGAATTTCAATGCCAGAATGCTATTATTGCCGAGCGGTTTATTGAAGCAGGTAGCCCTTATGTTCTGAAAAATGAAAAGGCTGATGTTTACCGGCTACCATATTTGTCAAGCAGTGGACCTGGATTCGCTCTACTTGAAGCTGCAAGAAAAGCTAATTTCAAAGGCACTTTCAGTGAAATAGCAGAAGGATTTGCAACTAACAGATGGGATAAACCTGTACTGCTTGCTTGGGGATTATCAGACAAGTACTTGCCACAATCTATCGCCGAGGAGTTTCAGCAAGGAAATCCTCAAAACATCAAGCTTAAATTGATAGAAGGAGCAGGTCATATGCCGCAAGAGGATTGGCCTGAGAAAGTTGTTGATGCTTTCAGAATGTTCTTTTGA 1119 0.4138 MVFSAMFSPTLNLAISSTTKCCSRRRESRRGLNSMRVRASSTDKDEDEKSSFNPFGFVTDNASSRSAIQLPETPAEAGNVGQMIDKIQDKGKEFGSYVKSGKLRWFVRETGSVKSRRGTIVFLHGAPTQSFSYRVVMSQLADAGFHCFAPDWIGFGFSDKPQPGYGFNYTEKEFHDALDKILEVLKIESPFFLVVQGFLVGSYGLTWALKNSSKISKLAILNTPLTASSPIPGLFQQLRFPLYGEFQCQNAIIAERFIEAGSPYVLKNEKADVYRLPYLSSSGPGFALLEAARKANFKGTFSEIAEGFATNRWDKPVLLAWGLSDKYLPQSIAEEFQQGNPQNIKLKLIEGAGHMPQEDWPEKVVDAFRMFF 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00228 372 PANTHER HYDROLASE ALPHA/BETA FOLD FAMILY 59 372 - -
Vivi5g00228 372 MobiDBLite consensus disorder prediction 24 51 - -
Vivi5g00228 372 Pfam alpha/beta hydrolase fold 119 359 IPR000073 -
Vivi5g00228 372 Gene3D alpha/beta hydrolase 81 371 IPR029058 -
Vivi5g00228 372 PRINTS Alpha/beta hydrolase fold signature 317 331 IPR000073 -
Vivi5g00228 372 PRINTS Alpha/beta hydrolase fold signature 144 159 IPR000073 -
Vivi5g00228 372 PRINTS Alpha/beta hydrolase fold signature 208 221 IPR000073 -
Vivi5g00228 372 PRINTS Epoxide hydrolase signature 349 371 IPR000639 GO:0003824
Vivi5g00228 372 PRINTS Epoxide hydrolase signature 124 142 IPR000639 GO:0003824
Vivi5g00228 372 PRINTS Epoxide hydrolase signature 144 159 IPR000639 GO:0003824
Vivi5g00228 372 FunFam Alpha/beta-Hydrolases superfamily protein 82 372 - -
Vivi5g00228 372 SUPERFAMILY alpha/beta-Hydrolases 96 371 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00228 Vivi-Chr5 2837080 2840614 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00228 - - gmx:100793646 641.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g00228 5 2837080 2840614 Vivi5g00228 5 2837080 2840614 ECH