Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00225 ATGTCTACAGATGATGTTTTCATTGGATCAATTGATCAAGGAACAAGCAGTAGCAGATTCATAATCTATGACAAATCAGCTACACCAATTGGATCTCACCATGTTGAATTCACTCAGTTTTATCCACAAGCAGGGTGGGTTGAGCATGATCCAATGGAGATATTGGAGAGTGTGAAGGTTTGTATTACTAAGGCGGTGGATAAGGCAACAGCTGATGGATTCAATGTGAGTAAAGGGTTGAAAGCTATTGGGATTACAAATCAAAGAGAGACTACTCTTGTTTGGAGCAAATCCACTGGTGCCCCTCTTCACAATGCTATTGTTTGGATGGATGTTCGCACTGCCTCCGTTTGCAGGAGACTGGAAAAGGAGTTATCTGGCGGTAGAACACACTTCGTAGAGACTTGTGGTTTACCTATTAGCACCTATTTCAGTGCTTTGAAACTTCTGTGGTTGATGGAAAATGTGGATGCTGTCAAGGAAGCTATAAAGAAAAATGATGCCTTGTTCGGAACCATAGACACTTGGTTGATATGGAATTTAACCGGTGGAGTGAAAGGAGGATTACACGTTACCGATGTTTCAAATGCATCCCGAACAATGCTGATGAACCTAAAATCCCTCAACTGGGATGAATCCACTTTGAAAACACTTGAAATCCCTCCTGAAATTTTGCCTAAAATTATTAGTAATTCAGAAATTATAGGCAATGTTGCTACTGGATGGCCAATTTCCGGTATCCCTATTGCTGGATGTTTAGGCGATCAACATGCAGCCATGCTTGGACAAGCGTGCCGTAAAGGTGAGGCTAAAAGTACTTACGGAACAGGTGCATTCATTCTATTGAATACCGGCGAAGAAGTAGTTCAATCGACGCATGGCCTACTATCAACTATTGCTTTTAAGCTTGGTCCTAATGTTCCAACCAATTATGCGCTGGAAGGATCTGTTGCTATTGCTGGAGCAGCGGTACAATGGATTAGAGACGGTCTTAATCTCATCTCAAATGCCAGTGAAATAGAGGCTATGGCATTAGGAGTTGAATCCAACGGCGGTGTTTACTTTGTTCCTGCTTTCAATGGATTGTTTGCTCCATGGTGGCGTGATGATGCTCGTGGGGTTTTAATTGGAATTACGAGGTATACAAATAAGGGTCACATTGCTCGAGCCGTGCTCGAGAGCATATGTTTTCAAGTGAAAGACGTCATTGATTCTATGCGCAAAGATTCTGGATTCAATGAATCTAACAAAGAGGAGTTCTTGCTTAGAGTAGATGGTGGTGCAACTGTTAACAACCTGATGATGCAGATTCAGGCGGATTTGTCCGCAACTCCTGTAGTTAGACCTGCTGACGTTGAAACAACAGCTCTCGGAGCAGCATATGCAGCTGGATTAGCTGTTGGAGTTTGGAACGAAGATTACATTTTCGGTTCTAAGGATAAAATGAAGAATGCAAACATTTTCCGACCTCTAATGAACGAAGAAATGAGGAAAAAGAAAGCAGATTCTTGGTTAAAAGCTGTTAACAAATCTTTTGACTTGGCTGATCTTGCTCTCTAA 1560 0.4192 MSTDDVFIGSIDQGTSSSRFIIYDKSATPIGSHHVEFTQFYPQAGWVEHDPMEILESVKVCITKAVDKATADGFNVSKGLKAIGITNQRETTLVWSKSTGAPLHNAIVWMDVRTASVCRRLEKELSGGRTHFVETCGLPISTYFSALKLLWLMENVDAVKEAIKKNDALFGTIDTWLIWNLTGGVKGGLHVTDVSNASRTMLMNLKSLNWDESTLKTLEIPPEILPKIISNSEIIGNVATGWPISGIPIAGCLGDQHAAMLGQACRKGEAKSTYGTGAFILLNTGEEVVQSTHGLLSTIAFKLGPNVPTNYALEGSVAIAGAAVQWIRDGLNLISNASEIEAMALGVESNGGVYFVPAFNGLFAPWWRDDARGVLIGITRYTNKGHIARAVLESICFQVKDVIDSMRKDSGFNESNKEEFLLRVDGGATVNNLMMQIQADLSATPVVRPADVETTALGAAYAAGLAVGVWNEDYIFGSKDKMKNANIFRPLMNEEMRKKKADSWLKAVNKSFDLADLAL 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00225 519 Pfam FGGY family of carbohydrate kinases, C-terminal domain 270 466 IPR018485 GO:0005975|GO:0016301
Vivi5g00225 519 NCBIfam glycerol kinase GlpK 7 512 IPR005999 GO:0004370|GO:0006072
Vivi5g00225 519 FunFam Glycerol kinase 264 514 - -
Vivi5g00225 519 SUPERFAMILY Actin-like ATPase domain 8 265 IPR043129 -
Vivi5g00225 519 SUPERFAMILY Actin-like ATPase domain 265 511 IPR043129 -
Vivi5g00225 519 PIRSF GlpK 5 518 IPR000577 GO:0005975|GO:0016301
Vivi5g00225 519 ProSitePatterns FGGY family of carbohydrate kinases signature 2. 373 393 IPR018483 GO:0005975|GO:0016773
Vivi5g00225 519 Gene3D - 4 263 - -
Vivi5g00225 519 Gene3D - 264 513 - -
Vivi5g00225 519 FunFam Glycerol kinase 5 263 - -
Vivi5g00225 519 Pfam FGGY family of carbohydrate kinases, N-terminal domain 8 262 IPR018484 GO:0005975|GO:0016301
Vivi5g00225 519 ProSitePatterns FGGY family of carbohydrate kinases signature 1. 143 155 IPR018483 GO:0005975|GO:0016773
Vivi5g00225 519 PANTHER SUGAR KINASE 7 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00225 Vivi-Chr5 2773594 2776862 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00225 K00864 - gmx:547750 884.019
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g00225 5 2773594 2776862 Vivi5g00225 5 2773594 2776862 ECH