Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00211 ATGGATTCCAATAATTGGATACCTAATCAAGGTGAACCCACTCTTGACTCTATTGATTGGAGAACTCAACTTCATCCTGAATCCCGCCAAAGAATTGTCAACAAAATAATGGACACATTAAAGAAACATCTTCCGGTTTCTGGGAACGAGGGATTGCTTGAACTTCGGAAGATTGCTCAAAGGTTTGAAGATAAGATTTATACTGCCGCCACAAGCCAGTCTGATTATCTTCGAAAGATTTCTATGAAAATGCTTACAATGGAGACCAAATCTCAAAGCACCATTGCTGGCAATATGCCATCAAATGAAGGAGGTTCTAGCAATAATCCGCCCGATCAAGGACTTGTTTTACAGTCTCAAGTTCTTAATCCCGGACAACAACACCCTAATCCTCGTCAGCAGCTTCTACCCCAAACCATTCAAAATCATGTTGCACCTCAACCTAACCTGCCATCGGTATCAACTCTATCCCAGACCCCCAGCCAGAATATTAGCCAAAATTCCAACACACAACAACCCGGGCAAAATTCTGCGAGTAATTCTATTGGCCAGAATTCCAATATACAGGGTATGTATCCTGGTTCTCAAAGACAAATGCAAGTCAGGCAGCAAGTTGTTCCCCCACAGCAACAGCAACAGCAACAGCAACAACCACAGAATCAACAGATTCTTTACCAGCAGCAGCAACAGGTTATGAAGCATAAGCTGTCTCAGATGCAGCAGCAGCAACAACAGCAGAACCTTCTGCAACCAAATCAGCTGAATAACTCTCAACAATCTGTTATGCAAACATCATCTGCTATGCAGCCTTCGACAATGCAGTCGTCTCTATCTAGCATTTCACAAAATCAGCAGTCTAACAATGTTCAACAGTCAACACAGTCTAGGCTTCAGCAACATTCCCAAATTATTAGGCAGCAACAGCAACAGAATTCTAATGCTCAACAGCAACAAACATCGATGACTCAACAGTCAATCTTGCCTGCGCAGCAACAACAGCAGTTTGGAGGGCCTCAATCAAATGTAACAAATGGGCAACATGCTCAGATACTTGGACAACAGAACACTGTTGGTGACACACTCAAGTCCCAGAGGTTACATCCACAACAGAATAATCTCATGAACCCGCAACAGAGACAACAACAGTTAATAAATCAGCAAAACAATCTAACAAATATACATCAACAACAGTCGGGAAATAATGTACCAGGGTTACAGCAACAGCCGTTTGGAACTGATTCTGGCAACCAAGGCATCCAAACAAGCCATCATTCTGCACAGATGTTGCAACAACCAAAGGTTTCAATGCAGCAACAATTGCAACACAATGAATCAAAGTTGTTGCCATCTCAGTCGCAGCAGTCCCAGCCACAGGCTTCACAGCAGCAATTAATGTCGCAGATTCACAATCAGCCTGCACAGATGCAACAGCAAATGGGTTTGCAGCAGCAGCCAAGTTCTTTGCAACGAGATATGCAGCAAAAACTCCAAGCATCAGGGTCTTTACATCAACAGCAAAGTGTTCTTGATCAGCAAAAACAATTATATCAATCCCAAAGAGCTCTTCCTGAAACATCCACAATTACTACAACACAGACTGCTCAACCAAGTGGGGGTGATTGGCAAGAAGAATTATACCAAAAGTTGCAAACCATGAAAGAAAATTACTTGCCAGATCTGAATGAAATAGTCCAAAAAATTACTATGAGATTTCAGCAGTATGACACTACTCAACAGCCAAAGTCAGATCAGGCGGACAAGTTGAGGACATATAGAATGATGTTGGAGCGCATGATATCGTTCCTACAGATTCCTAAGAACATCATTACGCCTAGTTTCAAGGAAAAATTGGGAGCATATGAAAAGCAGATTGTAGGTCTCATAAGTTCATTTAGGCCCAGGAAAAGCATTCCGTCCTTGCAACCAGGACAGCTTCCTCCAACTCATATGTCTTCGATGCCACAGTCACAATCTCAAGTTACTTCAGTACAGTCTCATGAAAATCAAATGATCTCTCAGATGCAGCCATCAAACTTACAAGGTTCCGCAGCAACTCTGCAGCAGAACAATGCTGCAAGTTTGCAGCATAATTCTATGTCTGGTTTGTCAACAACACAACAAAATATGTTGAATACAATTCAACCAAGTAATAATGTAGACGCTGGACAAGGAAATTCTGCGAACTCTCTGCAACAGGTTCCCTTGAGCTCCCTTCAACAAAACAATGTTAGTACTCCTCAACAGACCAACATCAATTCATTATCATCACAAGGTGGGGTGAATGTGATCCAACCAAATCTAAATACCCATCAGTCAGGTTCCACTATGCTTCAGCCCCAACTTAAACATCAGGAACATCAGATGCTGCAGAATCAACAGTACAAACAACAATACCAGCAGCAAGGACAATTGATGCAAAGGCAGCAGATCCTACCGCAGCGACAGCAGCTACACCAGCCAGGAAAGCAACAGCTGTCAGTACAGTCTCAGATTAACCCAATGAGCGACATAAATGATATGAAAATGCGACAAGGATTAGGTGTTAAGCCAGGGGTATTTCAGCAACATATTGCCTCAGGTCAAAACTCAGCTTATTCCCATCAACAGTCTAAACAAGGGAGTCCATTTCAGGGTTCTTCACCCCAACTCTTTCAAGCTGCGTCTCCTCAAATTCCACAACACTCATCTCCCCAAGTTGACCAACAAACTCATCAACAGTCTCTAGCAAAAGTTGCGACTCCTCTGCAATCTTCTAATTCACCTTTTGGAGTCCCTACTCCTTCACCTCCCATGGCTCCATCTCCTATGCTAGTAGATTCTGAGAAGTCTGCTCCTGGTGTTTCATCATCAATTGCTGCCAATCTTGGACAACATACAGGGGGTGCAGCAGCACCAGCTCAATCCCTTGCCATTGGGACTCCTGGGATATCAGCCTCTCCTTTATTAGCAGAATTCAGTGGTCCAGATTGTGCATATTTTAATGCTTTCACAGCTACTTCTGGCAAGTCAACTGCAGAGCAGCCTATTGATCGTCTAATAAGAGCGGTGCAATCAATGTCAACCGAAACATTAACTGCTGCTGTCAATGATATCAGTTCAGTTGTCAGCATGAGTGATAGAATAGCAGGATCAGCTCCAGGTAATGGATCCAGAGCAGCAGTTGGGGAGGATTTGGTTTCCATGACTAATTGTCGTCTTCAGGCTAGAAATTTTATCACTCAAGATGGTACTAATGGAATCAGGAAGATAAAGCGCTATACTAGTGCTAGACCATTGAATGTTAAGTCATCTGCTGTGAGCAAGAATGACAGTATAAAACAGTTATCTGCTTCAGAGGCTTCTCAGCAGGAGTCAACTGCAACAACCAATTTCAAGAAACCAAAGGCCGAGGCTACTCATGCTCTTTTGGAAGAAATACAGCAAATTAATCGTAGACTTATTGACACAGTAGTAGAAATAAGTGACAGAGATGTTGATCCAACTGCAGCTGCTGTTGCTGCCGCTGAAGGGACAGATGGGACCGTTGTCAAATGTTCTTTCATTCCTGTGGCTCTCAGTCCATCTTTAAAATCTCATTATGCTTCACTACAGTATCCTATTCAGCCTCTGCGCTTACTGGTTCCTCCAAATTATCCTAATTCTTCTCCCATATTCCTAGACAAGTTTCCAGTTGAATCACGTAACGTGAATGAAGATCTTTCTGAGAAAGCGAAATCAAAGTTTAGCATGTCCCTACGTAATTTTTCACAACCGATGTCACTTAAAGATATAGTGAAGACTTGGGATGTTTCTGCTCGCGGTGTCGTTTCTGAATATGCACAACAATTTGGTGGAGGAACATTCAGCTCAAAGTATGGATCATGGAAAGATATCTTGACCGCATAA 3885 0.4268 MDSNNWIPNQGEPTLDSIDWRTQLHPESRQRIVNKIMDTLKKHLPVSGNEGLLELRKIAQRFEDKIYTAATSQSDYLRKISMKMLTMETKSQSTIAGNMPSNEGGSSNNPPDQGLVLQSQVLNPGQQHPNPRQQLLPQTIQNHVAPQPNLPSVSTLSQTPSQNISQNSNTQQPGQNSASNSIGQNSNIQGMYPGSQRQMQVRQQVVPPQQQQQQQQQPQNQQILYQQQQQVMKHKLSQMQQQQQQQNLLQPNQLNNSQQSVMQTSSAMQPSTMQSSLSSISQNQQSNNVQQSTQSRLQQHSQIIRQQQQQNSNAQQQQTSMTQQSILPAQQQQQFGGPQSNVTNGQHAQILGQQNTVGDTLKSQRLHPQQNNLMNPQQRQQQLINQQNNLTNIHQQQSGNNVPGLQQQPFGTDSGNQGIQTSHHSAQMLQQPKVSMQQQLQHNESKLLPSQSQQSQPQASQQQLMSQIHNQPAQMQQQMGLQQQPSSLQRDMQQKLQASGSLHQQQSVLDQQKQLYQSQRALPETSTITTTQTAQPSGGDWQEELYQKLQTMKENYLPDLNEIVQKITMRFQQYDTTQQPKSDQADKLRTYRMMLERMISFLQIPKNIITPSFKEKLGAYEKQIVGLISSFRPRKSIPSLQPGQLPPTHMSSMPQSQSQVTSVQSHENQMISQMQPSNLQGSAATLQQNNAASLQHNSMSGLSTTQQNMLNTIQPSNNVDAGQGNSANSLQQVPLSSLQQNNVSTPQQTNINSLSSQGGVNVIQPNLNTHQSGSTMLQPQLKHQEHQMLQNQQYKQQYQQQGQLMQRQQILPQRQQLHQPGKQQLSVQSQINPMSDINDMKMRQGLGVKPGVFQQHIASGQNSAYSHQQSKQGSPFQGSSPQLFQAASPQIPQHSSPQVDQQTHQQSLAKVATPLQSSNSPFGVPTPSPPMAPSPMLVDSEKSAPGVSSSIAANLGQHTGGAAAPAQSLAIGTPGISASPLLAEFSGPDCAYFNAFTATSGKSTAEQPIDRLIRAVQSMSTETLTAAVNDISSVVSMSDRIAGSAPGNGSRAAVGEDLVSMTNCRLQARNFITQDGTNGIRKIKRYTSARPLNVKSSAVSKNDSIKQLSASEASQQESTATTNFKKPKAEATHALLEEIQQINRRLIDTVVEISDRDVDPTAAAVAAAEGTDGTVVKCSFIPVALSPSLKSHYASLQYPIQPLRLLVPPNYPNSSPIFLDKFPVESRNVNEDLSEKAKSKFSMSLRNFSQPMSLKDIVKTWDVSARGVVSEYAQQFGGGTFSSKYGSWKDILTA 1294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00211 1294 Gene3D Coactivator CBP, KIX domain 18 96 IPR036529 GO:0003712|GO:0006355
Vivi5g00211 1294 Pfam KIX domain 19 95 IPR036546 -
Vivi5g00211 1294 MobiDBLite consensus disorder prediction 257 344 - -
Vivi5g00211 1294 MobiDBLite consensus disorder prediction 144 218 - -
Vivi5g00211 1294 MobiDBLite consensus disorder prediction 91 116 - -
Vivi5g00211 1294 Coils Coil 297 324 - -
Vivi5g00211 1294 MobiDBLite consensus disorder prediction 394 505 - -
Vivi5g00211 1294 MobiDBLite consensus disorder prediction 520 540 - -
Vivi5g00211 1294 MobiDBLite consensus disorder prediction 635 669 - -
Vivi5g00211 1294 MobiDBLite consensus disorder prediction 861 922 - -
Vivi5g00211 1294 FunFam Mediator of RNA polymerase II transcription subunit 15a 19 97 - -
Vivi5g00211 1294 MobiDBLite consensus disorder prediction 861 945 - -
Vivi5g00211 1294 Coils Coil 225 245 - -
Vivi5g00211 1294 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A-RELATED 853 1284 IPR044661 GO:0003713|GO:0031490
Vivi5g00211 1294 SUPERFAMILY Kix domain of CBP (creb binding protein) 19 91 IPR036529 GO:0003712|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00211 Vivi-Chr5 2516547 2526164 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00211 K14972 - gmx:100805336 1387.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g07755 2 225379553 225390337 Vivi5g00211 5 2516547 2526164 PCT