Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00187 ATGTTAAACGGCAAAACCGTAATTTCAGAACAAATCAATAATTCTTCAATTTATAAATACAGTTACACACAAAACCATGCTCCAAATCCAAACTATCAACATTACCCACCGGAATACTCGCCGCCGGTAAGTCCCACTCACTCCAATTCCCATTCTCTTCTTCTTGTTATTCCAAATTCAGATACCCATTTGAGAAAAGTGAACAACTTTGAAGAAAAATTGAAGAAAAAACCAACCACATCCAAAAAAAAAAACTGCTCCGGCCATAATGGAGAAATAGAAGTAGAAGCAAAACAACGACGCCGCAGAATGTTACTTTGTGGAAAAGCTTCACTAAACGGCACCGTTTCGGGATCGGTGCCGGTGTATCTTAACGTGTACGATCTGACAACATTCAACGGTTACGCTTACTGGCTTGGTCTCGGAGTTTACCATTCCGGCGTTCAAGTTCATGGTGTGGAGTATGCATTTGGGGCACATGAGCAAGAATCAACAGGAATATTTGAAGGAGATCCAAGAAAGTGTGAAGGGTTTAGATTTAGGAAGACAATATTGATTGGAAAAACAGATAAAGAGTTTGGTGAAGTGAGGGAAGTGATGGAAAAACTTGGTGGTGAATACAAAGGAAATGCTTACAATTTGATTACAAAAAATTGTAACCATTTTTGCAATGATGCTTGTCTTAAGCTCACTGGAAATTCTATACCTAGTTGGGTTAATCGTCTTGCTAGAATTGGTTCTATATGCAATTGTGTTATACCAGTAACATTGAATTCAACAAAAGTGAGACACCATCATAGAATAGAAGACAAACAATGTGAAGAAGAGAAACAAATTAAACAAGCATTAACAAGTGAATCAAACAAAGTTACTGTTTCAAATTCAACACCTTCAGCTTCACCTTCACCAGCACCTTCTACTAGCTCTGGTTTAAGAAGAGGAAGAAGTCGAACAAGACGACCTCTTCCTCCACCTTCACCTTTAATTGTTGCTTCCTCTTCTTCTTGA 1008 0.3829 MLNGKTVISEQINNSSIYKYSYTQNHAPNPNYQHYPPEYSPPVSPTHSNSHSLLLVIPNSDTHLRKVNNFEEKLKKKPTTSKKKNCSGHNGEIEVEAKQRRRRMLLCGKASLNGTVSGSVPVYLNVYDLTTFNGYAYWLGLGVYHSGVQVHGVEYAFGAHEQESTGIFEGDPRKCEGFRFRKTILIGKTDKEFGEVREVMEKLGGEYKGNAYNLITKNCNHFCNDACLKLTGNSIPSWVNRLARIGSICNCVIPVTLNSTKVRHHHRIEDKQCEEEKQIKQALTSESNKVTVSNSTPSASPSPAPSTSSGLRRGRSRTRRPLPPPSPLIVASSSS 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00187 335 ProSiteProfiles PPPDE domain profile. 120 257 IPR008580 GO:0008233
Vivi5g00187 335 MobiDBLite consensus disorder prediction 283 312 - -
Vivi5g00187 335 Gene3D PPPDE domains 116 274 IPR042266 -
Vivi5g00187 335 SMART DUF862_2a 120 258 IPR008580 GO:0008233
Vivi5g00187 335 Pfam PPPDE putative peptidase domain 121 254 IPR008580 GO:0008233
Vivi5g00187 335 MobiDBLite consensus disorder prediction 283 335 - -
Vivi5g00187 335 MobiDBLite consensus disorder prediction 28 47 - -
Vivi5g00187 335 PANTHER DESUMOYLATING ISOPEPTIDASE 119 299 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00187 Vivi-Chr5 2129797 2132231 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00187 K22763 - qsa:O6P43_017960 302.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g00187 5 2129797 2132231 Vivi5g00187 5 2129797 2132231 ECH