Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00162 ATGGAGGCACCTACTTCATGGGATTCTCTTCGCAAACAGGCGAGAAAACTTGAAGCTCAATTGGATGAGCAGATGAATCTTTATCGTAAACTTGTTTCTACTAATGTTTCGACAAAAGGTGATGCTGCGGAGAGTGATCTAGAGTCTTGGATTGAGCGGTTAATAAAACAACTCCAACAAGTAAACTCACATATGCAAGCTTGGGTGTCATCTGGTGGTTCCGATATGGTTTCTCATACTTTGACTAGACACCAAGAAATTCTTCAAGATCTCGCTCAGGAATTTTATCGTCTCCGCTCAAGTCTTCGAGCAAAGCAAGAACATGCTTCACTTTTAGACGATTTTAAAGAATTTGATAGGTCAAGATTAGACTTGGAAGAGGATGGCGAATCAGAACAGCATACGCTCCTAAAAGAGCATGCTTCTATCAGTCGAAATACCGGACATATGGACGGTGTAATTTCACAAGCACAAGCAACACTAGGGGCACTTGTCTTCCAACGTTCGACATTTGGTGGCATCAATTCAAAGCTCAGCAACGTGAGCAGTCGCCTCCCTACGGTAAATAACATACTGTCGGCAATAAAGCGGAAAAAGTCAATGGATACCCTTATACTTTCCCTTGTGGCATCTGTATGCACATTTCTGATTTTGATCTACTGGATAACCAAATGA 675 0.4193 MEAPTSWDSLRKQARKLEAQLDEQMNLYRKLVSTNVSTKGDAAESDLESWIERLIKQLQQVNSHMQAWVSSGGSDMVSHTLTRHQEILQDLAQEFYRLRSSLRAKQEHASLLDDFKEFDRSRLDLEEDGESEQHTLLKEHASISRNTGHMDGVISQAQATLGALVFQRSTFGGINSKLSNVSSRLPTVNNILSAIKRKKSMDTLILSLVASVCTFLILIYWITK 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00162 224 Coils Coil 7 34 - -
Vivi5g00162 224 Pfam Snare region anchored in the vesicle membrane C-terminus 136 199 - -
Vivi5g00162 224 PIRSF Golgi_SNARE 1 223 IPR023601 GO:0000139|GO:0005801|GO:0006888|GO:0016020
Vivi5g00162 224 PANTHER GOS-28 SNARE- RELATED 2 222 IPR023601 GO:0000139|GO:0005801|GO:0006888|GO:0016020
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00162 K08495 - gmx:100797885 382.489