Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00159 ATGGACTACAGCTCTGAAGAAGAGTCAGATATCAGTGAATCTGAGATTGAAGAATATTCTGAGAAACCTTACGAACAGTTAAAGGCTGGGAAGTACAAAGTTCGGAATTTCAATGGCACTCTTAGATGCCCATATTGTTCTGGAAAAAAGAAGCAGGAATTCAAATATAAAGACTTGTTGCAGCACGCAACTGGAGTAGGTAAAGGTTCAGCGAACAGAAGCACAATGCAAAAGGCGAACCACCTTGCTCTGGCAAAGTATTTGCAGACCGACTTAGTTAATGAAGCAGAACAAGTACCTCGCCCAGCTGAGACCCAAACTGCCATTCAACCTGTCCAGCCAGCTGAACTTTATGTTTGGCCGTGGACAGGCATAATTGTTAACATAAAGAGCGAATTGCATGATTCTGGATACTGGCTAAAGGAACTTGTCAAGTACAAACCACTGGATGTTCATGTATTCATGATGGATGGTGATGCTCAGGCTGTAATAGACTTCAACAATGACTGGAATGGTTTCACGAATGCATGTGATTTTGAAAAAACCTTGGAAACTAAACATCATGGAAAAAAGGATTGGAATTCGATGGACTTGCAGGCCAGTTCAGACATTTATGGATGGGTTGCACGTGAAGATGACTTTTATGGTGGAGGGCCAATTGGGGAGTACCTTAGCAACAAAAGAAGGCTGAGAACAATTGCGGAAATTGTAAATGAAGCACATGAAAGCAGAAACAGCATTGTGGAAAACCTGACTAATGAAATTGATATTACAAATGAAACCCTTGACAAAATGCAGTATAAGTATAATGAGAAGACTATGTCCTTAAGCAGAATGCTGGAGGAGAAAGATAAGCTTCACAATGCTTTTGTTGAAGAGTCGAGGAGTATGCAGCGTAAAGCTCGTGAGGAGGTACGAAGGATCTTGGAAGAACAAGAAAAGTTGAGTAATGAATTGGATGAGAAAATGCGGAAGCTTGACTCTTGGAACAGAGATCTGAATAAACGTGAGGTTCTAACTGATCAAGAGAGGCAGAAACTTGAAGAAGACAAGAAGAAGAAAGACATAAGGAATGATTCACTCTTGGCGGCTTCAAAGGAGCAGAAGATAGCTGATGAAAATGTCTTCAGACTTGTTGAAGAGCAAAAGAGAGAAAAAGAAGAGGCCTTAAATAAGATCCTTCTATTGGAAAAGCAACTAGATGCCAAACAAAAGTTGGAAATGGAAATTCAAGAGTTAAAAGGGAAACTGCAAGTTATGAAACATCTTGGAGATCAAGATGATGCAGCTATCAAGAAAAAAATGGAAGAAATGAATTCTGAATTGACTGAGAAAATAGAGAGTTTGGATGCTATGGAGTCCATGAATCAAACCCTCATGGTCAAAGAGCGCCTCAGCAATGATGAACTTCAGGAAGCTCGTAAAGAATTAATAGAAGGGTTAAATGAAATGCTGACCGGTAAAACTAATATTGGGACCAAGAGAATGGGAGACCTTGACCAGAAGGTTTTTGTGAATGCCTGCAAGAAAAGATTTTCTGATCCAGAAGAAGCTGGGATAAAGGGCCTTGAGCTTTGCTCTATGTGGCAGGAGAATGTGAAGAATACGGCTTGGCATCCTTTTAAAAATATTACCAAGAATGATACTCTTGTGGCAGTTGTAAATGAAGAAGATGAGAAACTAAGAAATCTCAAACAGGAATGGGGAGATGAGATATATTCAGCTGTTGAAACCGCCTTGAAAGAAGTAAATGAATACAATCCAAGTGGTGGGTATACTGTTTGGGAGCTATGGAACTTCAAGGAAAACAGAAAGGCAACATTGAAAGAAGTTATTACTTATATTGTGGAACACATGAAGAACCTCAAGCGCAAGAGAAAATAG 1884 0.3976 MDYSSEEESDISESEIEEYSEKPYEQLKAGKYKVRNFNGTLRCPYCSGKKKQEFKYKDLLQHATGVGKGSANRSTMQKANHLALAKYLQTDLVNEAEQVPRPAETQTAIQPVQPAELYVWPWTGIIVNIKSELHDSGYWLKELVKYKPLDVHVFMMDGDAQAVIDFNNDWNGFTNACDFEKTLETKHHGKKDWNSMDLQASSDIYGWVAREDDFYGGGPIGEYLSNKRRLRTIAEIVNEAHESRNSIVENLTNEIDITNETLDKMQYKYNEKTMSLSRMLEEKDKLHNAFVEESRSMQRKAREEVRRILEEQEKLSNELDEKMRKLDSWNRDLNKREVLTDQERQKLEEDKKKKDIRNDSLLAASKEQKIADENVFRLVEEQKREKEEALNKILLLEKQLDAKQKLEMEIQELKGKLQVMKHLGDQDDAAIKKKMEEMNSELTEKIESLDAMESMNQTLMVKERLSNDELQEARKELIEGLNEMLTGKTNIGTKRMGDLDQKVFVNACKKRFSDPEEAGIKGLELCSMWQENVKNTAWHPFKNITKNDTLVAVVNEEDEKLRNLKQEWGDEIYSAVETALKEVNEYNPSGGYTVWELWNFKENRKATLKEVITYIVEHMKNLKRKRK 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00159 627 Coils Coil 248 268 - -
Vivi5g00159 627 Coils Coil 432 455 - -
Vivi5g00159 627 MobiDBLite consensus disorder prediction 1 15 - -
Vivi5g00159 627 Pfam XS domain 116 214 IPR005380 GO:0031047
Vivi5g00159 627 Coils Coil 291 350 - -
Vivi5g00159 627 MobiDBLite consensus disorder prediction 1 22 - -
Vivi5g00159 627 Pfam XH domain 494 625 IPR005379 -
Vivi5g00159 627 Gene3D XS domain 112 270 IPR038588 -
Vivi5g00159 627 Pfam XS zinc finger domain 43 85 IPR005381 GO:0031047
Vivi5g00159 627 PANTHER RIBONUCLEASE P SUBUNIT P38 3 627 IPR045177 GO:0080188
Vivi5g00159 627 Coils Coil 379 423 - -
Vivi5g00159 627 Coils Coil 547 567 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00159 Vivi-Chr5 1970119 1975903 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00159 - - gmx:100798940 955.666