LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi5g00143	ATGTCGGGTCCACCGAGAGTTCGATCCATGAATGTGACAGTTGGAGATTCTGATTCCCGGCCTGTACTTGTCCCTGCCGGGAACAAGGTTTGCACTGTCAAGAAAGTGAAGAAACCGGCGTCGGAAACGGAGAAGAAGTCCTCCGAGGAGGCGGTTATGAATTCGCAATGTGCGTTGGTTACTCCGGTGGTTTCGAAGCGGCGGGAGAGTCATCGATTGGTAGGGATGAAAAGTGTGTCGATGAATGCTTCGTGCTCGTCGGATGCTTCGTCGACGGGTTCTTCAACTTATAGTAGTGGTATGTCGTCGAGCGGGAAAGTGGCGAGCCGAGGAAGGAAGAAGCAGGTTGGTTTGAAGGTTGAGAAGGTGAGCATTGATGCTGTGGCTGGTCCTGTTGAGGTGGATTCGAGTGTTGGCTTGGAGGGCAAGAAAAGGTGTGCTTGGGTTACACCAAATTCAGAACCATGTTATATTGCTTTTCACGACGAAGAGTGGGGAGTTCCGGTTCATGATGACAAGAAACTGTTTGAGTTGCTCAGCTTCTCTGGAGCCTTGGCGGAACTCTCGTGGCCTACCATTCTTGGAAAAAGGCAGTTATTTCGGGAAGTATTTTTGGATTTTGATCCATGTGCGGTTTCAAAAATGAATGAGAAAAAGACAGTTGCACCGGGAAGTCCTGCCAGCTCACTGCTGTCAGAGCTCAGGCTACGATCCATAATTGAAAATGCACGTCAGATGTGTAAGGTAATAGAAGAGTTTGGGTCCTTTGACAACTACATTTGGAACTTTGTGAACAATAAGTCTATAGTCAATCAATTCCGTTACCCTCGCCAAGTACCTGCCAAATCTCCGAAAGCAGAATTCGTAAGTAAAGACCTCGTAAAGAGAGGGTTTAGGAGCGTGGGACCGACCGTCATCTACACTTTCATGCAAGTGGCTGGTCTAACAAATGACCACCTTATCAGTTGCTTCAGATTCAAGGAATGTATCTTCTCCAAAGCAGAGGCCGAAGACAAAGAAAGCAGCTCCCTCAACTCTAAGGTCAAAGAGAAAGCAAACGAGGATCCCACCAATGTCGGTCTGATGCTAGCTGTGAACAAGTTGAGTTTCTCCTCTTAG	1119	0.4772	MSGPPRVRSMNVTVGDSDSRPVLVPAGNKVCTVKKVKKPASETEKKSSEEAVMNSQCALVTPVVSKRRESHRLVGMKSVSMNASCSSDASSTGSSTYSSGMSSSGKVASRGRKKQVGLKVEKVSIDAVAGPVEVDSSVGLEGKKRCAWVTPNSEPCYIAFHDEEWGVPVHDDKKLFELLSFSGALAELSWPTILGKRQLFREVFLDFDPCAVSKMNEKKTVAPGSPASSLLSELRLRSIIENARQMCKVIEEFGSFDNYIWNFVNNKSIVNQFRYPRQVPAKSPKAEFVSKDLVKRGFRSVGPTVIYTFMQVAGLTNDHLISCFRFKECIFSKAEAEDKESSSLNSKVKEKANEDPTNVGLMLAVNKLSFSS	372

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi5g00143	372	Gene3D	Hypothetical protein; domain 2	143	326	-	-
	Vivi5g00143	372	Pfam	Methyladenine glycosylase	152	325	IPR005019	GO:0006284\|GO:0008725
	Vivi5g00143	372	MobiDBLite	consensus disorder prediction	81	111	-	-
	Vivi5g00143	372	SUPERFAMILY	DNA-glycosylase	144	330	IPR011257	GO:0003824\|GO:0006281
	Vivi5g00143	372	PANTHER	OS04G0501200 PROTEIN	6	337	-	-
	Vivi5g00143	372	MobiDBLite	consensus disorder prediction	1	23	-	-
	Vivi5g00143	372	MobiDBLite	consensus disorder prediction	81	109	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vivi5g00143	Vivi-Chr5	1832598	1838562	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi5g00143	K01246		-	gmx:100805836	496.893