Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00128 ATGGCTCATGATATTTCATCTGCTAAGTTGTTATCAAAGTGTGACATAAATTATTTATCAGATGATTTATTAGCCCAAATCTTCACTCTTTTGCCATTCAAATCCACCATGGGATGCAAATGTGTTTCAAAAAGATGGTTAGAGTTGATTTCAAGTCCTTATTTCAAAAAACAATTTACATCTCTTCAACACTCTCTTTTCAAATCAATCTTAATGTTTGTTACACCTCATGAAATTATGTTGGCTTTTATAGAACAATCTCAAAAATATGATCCTATGAAAATTCCCATAACCTTTCCACCGGATATGCTCGTCAAAGGAAGCGTATGCGGCTGTTCCCACGGTATATTCTTGTGTTGTAACAGCCGTTACACCTACGGTGGCGACTATTATATTTATGATCCGCTAATGAAAGAATGTGTTCCTATACCGCCTTCTCCTGCGACATGTAATGAAAGTTTATTCGCTGTAGGGTTCATTTGTACCCCTTTAACCAATGATAAAACAATAACTTCTTATCCAGATGAACGCGACTTTCGAGTCGTGATCATAAAATCATTTATAAGAAGAATGTTTGAGGTTGAATTATATATTTTCTCGTCGGACACGGGGCAATGGAAACACATTGTTATGAATATCCCGGACGGGTTCGCTTTCGCGCCCCATTGGCTACTAAGTTTTTCATATAATGGAAGCTTGTATTTCATGGGGAGAACAAATATTCTTGTGTTGAATCCTTATACAAACCATAGCTACACACTTGATTATCCATTAAAAGCTGATTCAATGAATATAATGAGTTTTGGCTTTCTTGGAACTTCTTGTGGTGGGTTAAGAATTGGTGAAATTGGACAAAATGAATTAAAAATTTGGGAACTTATTGAAAAGAATAATTGGGATTTGTTGCATAGGATTGATATAAAGAAAAAATTGCCAGAAAAGTTTTGTGGTAATTATTATAAGAGGGTTGCAGGGTTTCATCCTTATGATGGGGACATTGTGTATTTACATTCCTATGCTGATGGATTTTTTGTTTGTAACTTAAGGAGTGAGAAATTTGAAGGTGTTTCTGGTTATGAAAAAATTGATATAAGTCCTTTTCAATTAGAGATAGAAGATTTGTTGCCTCAAGAATCATAA 1140 0.3456 MAHDISSAKLLSKCDINYLSDDLLAQIFTLLPFKSTMGCKCVSKRWLELISSPYFKKQFTSLQHSLFKSILMFVTPHEIMLAFIEQSQKYDPMKIPITFPPDMLVKGSVCGCSHGIFLCCNSRYTYGGDYYIYDPLMKECVPIPPSPATCNESLFAVGFICTPLTNDKTITSYPDERDFRVVIIKSFIRRMFEVELYIFSSDTGQWKHIVMNIPDGFAFAPHWLLSFSYNGSLYFMGRTNILVLNPYTNHSYTLDYPLKADSMNIMSFGFLGTSCGGLRIGEIGQNELKIWELIEKNNWDLLHRIDIKKKLPEKFCGNYYKRVAGFHPYDGDIVYLHSYADGFFVCNLRSEKFEGVSGYEKIDISPFQLEIEDLLPQES 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00128 379 Gene3D - 10 70 - -
Vivi5g00128 379 Pfam F-box domain 19 56 IPR001810 GO:0005515
Vivi5g00128 379 SUPERFAMILY F-box domain 9 88 IPR036047 GO:0005515
Vivi5g00128 379 PANTHER F-BOX PROTEIN INTERACTION DOMAIN PROTEIN-RELATED 19 350 - -
Vivi5g00128 379 SUPERFAMILY Galactose oxidase, central domain 106 257 IPR011043 -
Vivi5g00128 379 SMART fbox_2 19 59 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00128 Vivi-Chr5 1533075 1534289 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00128 - - cam:101504200 577.015