Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00125 ATGGCTGCTGCTACTGTTGTTGGTGTTATTGGTGGTAATGGATCTTCTGTTTCATGGATGCAATTTGGAAGAAAGGGAAAGAAACAAAATAAGATGAACAGAGTTAGGGTTTGTTGTTCTTCTTCATCTTCTGTGACGGATTCTTATAAAATGTTGAGGATTCAACCAGGTGCTTCTGAATCTGAAGTTAGAAAGGCTTTTAGACAACTTGCTTTGCAGTATCATCCAGATGTTTGCAAAGGAAAAGATTGTGGTGTGCAGTTTCATCAAATCAATGAGGCTTATGATGTTGTGATGGCAAAATTGAGAGAACCAAAAAAGGCAAAAAAAGCAACCTTAGATGACGAGTCATTTAGAGGAATGAATGATTCAGATTGGGAATATTGGGAGGAATGGATGGGTTGGGAAGGAGCATGGATTTCTCATATTAATCCTTACATTTGA 444 0.3784 MAAATVVGVIGGNGSSVSWMQFGRKGKKQNKMNRVRVCCSSSSSVTDSYKMLRIQPGASESEVRKAFRQLALQYHPDVCKGKDCGVQFHQINEAYDVVMAKLREPKKAKKATLDDESFRGMNDSDWEYWEEWMGWEGAWISHINPYI 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00125 147 ProSiteProfiles dnaJ domain profile. 47 117 IPR001623 -
Vivi5g00125 147 SMART dnaj_3 46 103 IPR001623 -
Vivi5g00125 147 Gene3D DnaJ domain 21 109 IPR036869 -
Vivi5g00125 147 Pfam DnaJ domain 47 100 IPR001623 -
Vivi5g00125 147 CDD DnaJ 47 97 IPR001623 -
Vivi5g00125 147 PANTHER CO-CHAPERONE PROTEIN DJLA 39 144 - -
Vivi5g00125 147 PRINTS DnaJ domain signature 67 82 IPR001623 -
Vivi5g00125 147 PRINTS DnaJ domain signature 83 103 IPR001623 -
Vivi5g00125 147 PRINTS DnaJ domain signature 49 67 IPR001623 -
Vivi5g00125 147 SUPERFAMILY Chaperone J-domain 43 140 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00125 Vivi-Chr5 1517009 1518387 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00125 - - vvo:131601074 210.305