Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00025 ATGAACAACAATAACAACAGCGAGATTGTTATGGAAACCAAAAGAACGAGAACTGGAACTTCTGAATGTGGAAAACCGATTATAGCCTTGGTTTGCGGCACACTCGTTTACTATCACTGCGCTTTCAAGAATTCCGCTATCGTCTCTCTTTTCTCCGATGTCTTCATTGTTCTACTCTGCTCCCTCGCCATTCTCGGTCTTCTCTTCCGCCAAATGACCATTCAAGTTCCGGTGGATCCTCTTGAGTGGCAAATATCTCAGGACACTGCTAATACTATTGTTGCTTCTTTGGCTAACACCGTCGGTGCCGCTGAGTCTGTTTTGAGAGTTGCCGCTACCGGCCATGACAAAAGACTCTTTCTTAAGGTCATTCTTTGCCTTTATGCATTATCTGCTCTTGGAAGACTTGCTTTCGGTATTACTATTGCATATGCTGGACTATGCTTGTTTTGTCTTTACATGTTGGCGGAATGCTCTCAATCAATCAGTTCAGCTCTAGCCGGGTTCTTGGGAAGAAGAAACGACACTAGTGGAGAACAAGACACGATTGAGTAA 555 0.4414 MNNNNNSEIVMETKRTRTGTSECGKPIIALVCGTLVYYHCAFKNSAIVSLFSDVFIVLLCSLAILGLLFRQMTIQVPVDPLEWQISQDTANTIVASLANTVGAAESVLRVAATGHDKRLFLKVILCLYALSALGRLAFGITIAYAGLCLFCLYMLAECSQSISSALAGFLGRRNDTSGEQDTIE 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00025 184 PANTHER RETICULON-LIKE PROTEIN B22 10 182 IPR044177 -
Vivi5g00025 184 Pfam Reticulon 28 150 IPR003388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00025 Vivi-Chr5 234871 237446 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00025 - - psat:127107162 338.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g00025 5 234871 237446 Vivi5g00025 5 234871 237446 ECH