Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00024 ATGGATTTTTTGAAGATTAAAAACAAGTTTAGAAAGTCTCAGAAAGGAGGTGTTGAAAAAGATTTGGTAGACAAGGCAGTGCCGGAGCCTGAGGAACCGAAGCCGAATGGTGGTGATCTGGATCAGTGTAAATCAGTTAATGCAGATTCTGCTGGTGATGCTGAGGAGGACGACGATGATTTTATTACCAATGAGGTGAAGAGGAGGCTCAAGGAATTGAGAAGAAACAGTTTTATGGTGTTGATTCCCGAGGAAGATTCGTGTCTGGAGGAAGGGGAGGATGAAGAGGAAGAGGGAGAGACGGGTTCTAATGAATGGAGGGATGTGGAGGCAGAAGGTCAGCAATGGTGGCGAGGCTTTGATGCTGTTTATGAAAAGTACTGTGAAAGAATGCTGTTCTTTGATCGGATGTGCGTGCAGCATCTTAGTGAAATCGGAAAAGGTTCTCAGAACACTCCAACTCCATCTCCAAGATCTACTACAGCAAAGAAACTGGTCTCTCCCATGCGGTGTCTTTCCTTGAAAAGGTTTGAAGAACCAGATGATGAGTTTGAACATCTTCAACAGCCTGAAAATTGTCCCTACTTGGATATTGAAACGGCATATATAGGTCAAATTTGCTTGACTTGGGAGGCACTTCATTGTCAATACTCTCATATGAGTTATAAGATATCTTGGCAACACGAAAATCCTACATGTTATAACCGAAGTGCACAGGAGTTTCAACAGTTCCAGGTTCTATTGCAGAGGTTTATTGAAAATGAACCTTTCGAGCAAGGACTTCGACCTGAAATTTATGCTCGCACAAGGAATACTTTGCCTAAACTGCTTCAGGTTCCTAATATAAGAGGTTCAGATAACGAATTAACAGATGAATCAGATACGAGAGTTCTTGCTCCAGATTTGATCAGGATAATTGAAAACTCTATCCTTACTTTCCACCTTTTCCTGAAAAGGGACAAGAAGAAGTCAAATGGTGTTATCAACCTGTTCGGAAATCAGAACCAGCTTGCAACTCCTCTACATCAGATTCAGTCTACTCTTGAGAAGAAAGTGGTGAAACTGAAGGAACTGCGAAAAAGGAAGAAGGGTTGGAGAAAAAGTTCTTGGCCACAAAAGCACGAGGATATCCAACTATTGCTTGGCCTAATTGATGCGAAAATTCTATCAAGGGTTCTGAGAATGACAAGGATGACTAGAGAACAACTGTTTTGGTGTGAAGAAAAGATGAAAAAACTTGATTTATCAAATAGTAAGTTAGAGAGGGATCCATGTCCCATTCTCTTCCCTTGCTAA 1296 0.4136 MDFLKIKNKFRKSQKGGVEKDLVDKAVPEPEEPKPNGGDLDQCKSVNADSAGDAEEDDDDFITNEVKRRLKELRRNSFMVLIPEEDSCLEEGEDEEEEGETGSNEWRDVEAEGQQWWRGFDAVYEKYCERMLFFDRMCVQHLSEIGKGSQNTPTPSPRSTTAKKLVSPMRCLSLKRFEEPDDEFEHLQQPENCPYLDIETAYIGQICLTWEALHCQYSHMSYKISWQHENPTCYNRSAQEFQQFQVLLQRFIENEPFEQGLRPEIYARTRNTLPKLLQVPNIRGSDNELTDESDTRVLAPDLIRIIENSILTFHLFLKRDKKKSNGVINLFGNQNQLATPLHQIQSTLEKKVVKLKELRKRKKGWRKSSWPQKHEDIQLLLGLIDAKILSRVLRMTRMTREQLFWCEEKMKKLDLSNSKLERDPCPILFPC 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00024 431 Coils Coil 341 361 - -
Vivi5g00024 431 MobiDBLite consensus disorder prediction 86 103 - -
Vivi5g00024 431 MobiDBLite consensus disorder prediction 12 62 - -
Vivi5g00024 431 Pfam Protein of unknown function (DUF1666) 197 430 IPR012870 -
Vivi5g00024 431 PANTHER DNA LIGASE (DUF1666)-RELATED 35 431 - -
Vivi5g00024 431 MobiDBLite consensus disorder prediction 12 38 - -
Vivi5g00024 431 MobiDBLite consensus disorder prediction 85 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00024 Vivi-Chr5 230174 232871 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00024 - - gmx:100804417 678.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g00024 5 230174 232871 Vivi5g00024 5 230174 232871 ECH