Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00018 ATGTCGGCGTACGAGAATGTTGTTGGTGGTAAATTGAAGCTGAAGGGAAAAGCATTGGATGTTGCTGGTAGAATCAAAAAGAAGAAAAAGAAGAGTAAAAGAAATCAACAACAGTTTTTGCAACCAACTGATGATGAAGTTTCAGCAGGTGGAAGTACAGAGCAAGCTAAAGATCCTAATGACCAAGAAGTAAATGAGGGGGGTGAACTGAACGGTGAAGAGAAGCCTGCTCATTATGATGATCATCTTACGCCAGCAGAGAGGCGGTACATAGAACAGAGAGAGCAGCTTGATGTTCATAGATTGGCCAAGATTTCTAACAAATCTCACCGCGATAGGATTCAAGATTTCAATCAATACCTCGCAAACATGAGCGAGCACTATGATATTCCTAAAGTTGGTCCTGGATGA 411 0.4161 MSAYENVVGGKLKLKGKALDVAGRIKKKKKKSKRNQQQFLQPTDDEVSAGGSTEQAKDPNDQEVNEGGELNGEEKPAHYDDHLTPAERRYIEQREQLDVHRLAKISNKSHRDRIQDFNQYLANMSEHYDIPKVGPG 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00018 136 Pfam FAM32A 3 96 IPR013865 -
Vivi5g00018 136 MobiDBLite consensus disorder prediction 25 89 - -
Vivi5g00018 136 MobiDBLite consensus disorder prediction 59 89 - -
Vivi5g00018 136 PANTHER UNCHARACTERIZED 1 136 IPR013865 -
Vivi5g00018 136 MobiDBLite consensus disorder prediction 36 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00018 Vivi-Chr5 201530 203303 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00018 K13120 K00213 gmx:100500638 217.238
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g00018 5 201530 203303 Vivi5g00018 5 201530 203303 ECH